Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0785 ATGTTTAAGTGGTTGATTTCTGGAATTCAGGTCCTTGAGAAGATCATAAAGGGAGTGGAGAATTTTGGTTTCTGTAGTAAAGGATGGATTGAGTCTCCTCTGAAAGGTGCTGAGGGTAATACAGAATTCCTTGTTCACTTCAATAGAACCAATAATGTGAAGGTTCCTGAAATCTGGATCCGGCCTGATGCATCACTAGTACTACATGGGATCACATGCACATTTGAAGGAGGCCACAAGATTGGTGTTGTTGGAAGAACAGGTAGTGGAAAATCCACTCTTATAGGTGCCTTATTCTGTGTAGTGGAGCCAGCAGGTGGAAAAATAGCAGTTGATGGCATAGACATTTGTTCTATTGGACTTCATGACTTGAGGTCATGCTTTGGTATCATACCTCAGGATCCTACTCTTTTTAATGGCACAATAAATCAACTCATGAATTAA 444 0.4054 MFKWLISGIQVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVHFNRTNNVKVPEIWIRPDASLVLHGITCTFEGGHKIGVVGRTGSGKSTLIGALFCVVEPAGGKIAVDGIDICSIGLHDLRSCFGIIPQDPTLFNGTINQLMN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0785 147 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 49 144 - -
Aed2g0785 147 Gene3D - 61 147 IPR027417 -
Aed2g0785 147 Gene3D Vaccinia Virus protein VP39 7 60 IPR029063 -
Aed2g0785 147 Pfam ABC transporter 68 141 IPR003439 GO:0005524
Aed2g0785 147 PANTHER ABC TRANSPORTER C FAMILY MEMBER 10 49 144 - -
Aed2g0785 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 143 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0785 Aed-Chr2 5843678 5847205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0785 61 144 Calmodulin-binding Proteins AT2G36910 33.333 8.50e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0785 K05666 - gmx:100784336 157.147