Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed2g0775 | ATGGCTATGGCTGCAAATGAAGATGCTGCACAGGAATTTGCACCAAAGAAGAAGCCACCTTCAGAGGATGAAAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCTTTGATGAGGCCTGGTGGGGGTGATGCTGTACCTTCAGAGGGTGACCAGATTATCTATCACTGCACAATTCGAACTTTGGATGGAGTACTTGTAGAATCTACCAGATCTAACTATGGAGGCAAGGGCACTCCAATAAGACATGTTTTGGGCAAAAGCAAGATGTTATTGGGCTTGCTAGAAGGAATTTCAACAATGTTGAAGGGTGAAGTGGCAATGTTTAAGATGAAGCCTCAGTTGCATTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATGGTTTTCCTAAAGATGATGAACTTCATTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGCAAGGATGTCAACTTTGACTTTTGTTGATACTGATGATTTGGGAGTTGTAAAAAAGGTAGTATGTGAAGGTCAGGGTTGGGAATCTCCAAGAGAACCTTACGAAGTGAAGGCTTGGATTTCAGCAAAGACAGCTACTGGGAAATTGATTATGTCACATACTGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGTATGACCAGAAAGTTGATCTCCACTTTAGCACTGAGCATATAAGCTCAACTGTGACATGTCTTTCTATAGCAAACATTGTCAGGCTACTTTTGATTTTGGTTTTCTGGCATAATTTGTGGGCAGTTTTTTCTACTGACCATAAATCTAAAGGTGGTGTGGCCCAACTTGGTGGGTGA | 831 | 0.4091 | MAMAANEDAAQEFAPKKKPPSEDEKRKKKIVPGSLMKALMRPGGGDAVPSEGDQIIYHCTIRTLDGVLVESTRSNYGGKGTPIRHVLGKSKMLLGLLEGISTMLKGEVAMFKMKPQLHYGEDDCPISAPDGFPKDDELHFEIELIEFFKAKARMSTLTFVDTDDLGVVKKVVCEGQGWESPREPYEVKAWISAKTATGKLIMSHTEGEPYFFTFGKSEYDQKVDLHFSTEHISSTVTCLSIANIVRLLLILVFWHNLWAVFSTDHKSKGGVAQLGG | 276 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed2g0775 | 276 | MobiDBLite | consensus disorder prediction | 11 | 29 | - | - | |
| Aed2g0775 | 276 | SUPERFAMILY | FKBP-like | 26 | 152 | - | - | |
| Aed2g0775 | 276 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 48 | 145 | IPR001179 | GO:0003755 | |
| Aed2g0775 | 276 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 8 | 207 | - | - | |
| Aed2g0775 | 276 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62 | 8 | 207 | - | - | |
| Aed2g0775 | 276 | Gene3D | - | 1 | 156 | IPR046357 | GO:0003755 | |
| Aed2g0775 | 276 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 52 | 148 | IPR001179 | GO:0003755 | |
| Aed2g0775 | 276 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed2g0775 | Aed-Chr2 | 5730920 | 5734482 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed2g0775 | 33 | 224 | Calmodulin-binding Proteins | AT3G25230 | 29.082 | 1.57e-12 | 65.5 |