Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0756 ATGAGTATTGATACCAATTTGGTTACTACTGTCATTGGGTTTGGTTTCAGTGCAACTTTCATTGTTTTTGTTTGCGCAAGAATAATCTGTGGAAGACTACGAGAGCGATCAAGGATTATATATGAAATTGAACCAATAACAGATATAGAGCGGGCAGAATATCATGGCAATGACTCTGCACCTGCTTTTGTTGCTGCAATTCCCACTTTGAATTTCAACCATGAAGCCTTCGAATACAAAGAAAAAGAACTATTGGGAATCATACCAAAATGTGGCCACACATTTCACCTTTCATGTATTGATATGTGGCTGAGAAAAAAATCCACATGTCCAATGTGCCGTTTGTCATTGCAGAATGGTTCTGAAACAAAACATGTGAGACATGTAACATTTACCATCAGACATTCTCTTGATGAGTCCAATGCTGATGAAGAAAGGAACACAGATACTGAGACGGAGAGACAAGTTGAACTTAATTCTATTAGTAACAACAACATCTCCCAACAACCAAGTTTGGGAGGAGAACCTCCAGAAGATAGATAG 543 0.3831 MSIDTNLVTTVIGFGFSATFIVFVCARIICGRLRERSRIIYEIEPITDIERAEYHGNDSAPAFVAAIPTLNFNHEAFEYKEKELLGIIPKCGHTFHLSCIDMWLRKKSTCPMCRLSLQNGSETKHVRHVTFTIRHSLDESNADEERNTDTETERQVELNSISNNNISQQPSLGGEPPEDR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0756 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 121 IPR013083 -
Aed2g0756 180 SUPERFAMILY RING/U-box 79 121 - -
Aed2g0756 180 ProSiteProfiles Zinc finger RING-type profile. 91 114 IPR001841 -
Aed2g0756 180 MobiDBLite consensus disorder prediction 137 180 - -
Aed2g0756 180 PANTHER OS02G0676500 PROTEIN 2 155 - -
Aed2g0756 180 MobiDBLite consensus disorder prediction 137 153 - -
Aed2g0756 180 PANTHER OS11G0150450 PROTEIN 2 155 - -
Aed2g0756 180 Pfam RING-H2 zinc finger domain 84 114 IPR024766 GO:0008270
Aed2g0756 180 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0756 Aed-Chr2 5526541 5527932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0756 78 165 C3H Transcription Factor Family AT4G10160 34.066 7.36e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0756 - - gmx:100810553 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0756 2 5526541 5527932 Aed2g0756 2 5526541 5527932 ECH