Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0753 ATGGCTGGAGCTGAAGCTACAAAACATGTTTCTGCTACAACAAGTCCTACAACAACTGCAGCTCCGAACAACAACATGGGCACAAGATCGAACAAGCCAACAACAACAATGATGAGAAGGTTCATTGGGGTGAGGCAAAGACCCTCAGGGAGATGGGTGGCTGAGATCAAAGACTCTTCTCAGCACGTGAGGTTATGGCTTGGAACCTACGACACTCCAGAAGAAGCTGCAAGGGCTTATGACGAAGCAGCACGTGCCCTGAGAGGTGAAAACGCTCGAACCAACTTTGTCACAGGTCAGCACCAATCACTATCAGGCTCTAACAATAGCCTTTCATCTGGGTCTGATGTTAATGGAAAACATGGCTTGAGCTTCGCTTCCTTGAAGGCCAAGCTGAGCAAGAATCTTCAGAACATCATGGCTAGAGCGAGTGATCACAACAACAGCAACAGCAATAACAGTAACAGCAACAAGTCCTCAAAGAGTAGGGTAAGTGATCACTTCACCTTTGCTAGCATCTTCCACAGAAGCAGGAGTAGTTACCAAATCCCTGAAGGGGACATGAACATGATGATGAGGAACAACCTTAATATTGATCAGAAAGTGGTGCAACCTAGTATTATTGTGCCTCCTAACAACTGGGAAAGTGCTTCTAGTGTGTCTGATTGCAGCTCTGAGTGGGCAGGGTTTGCGAATTCGAATTCGAAAGACGGGTCGGAGTTCGGAGAGGCCAGTGTTGGTGATCAAGGGTTCTTGGAGCAGCTGATGGGGTGGGTTGAAAGTCCTCATGATGTTGCTGTTAATGATGATCAGATTCAGAGTGAAGAGGGTTCAAGGAGTAAGAGGTTCAAGGTGTCTTCTTCTGTGCTTGTGCCACCAACTTTCTCTCCTTATGAGTGTGGATCCCCTTATAATAGCGGCTATGCCTCTCCATATAGTAACGGTTATGCCTCTCCTTATAATAATCACGGTTGTGCCTCCCCTTGTAACTATGGTTATGCTTCTCCCTATAATTACAATAAGAAGTGA 1029 0.4626 MAGAEATKHVSATTSPTTTAAPNNNMGTRSNKPTTTMMRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFVTGQHQSLSGSNNSLSSGSDVNGKHGLSFASLKAKLSKNLQNIMARASDHNNSNSNNSNSNKSSKSRVSDHFTFASIFHRSRSSYQIPEGDMNMMMRNNLNIDQKVVQPSIIVPPNNWESASSVSDCSSEWAGFANSNSKDGSEFGEASVGDQGFLEQLMGWVESPHDVAVNDDQIQSEEGSRSKRFKVSSSVLVPPTFSPYECGSPYNSGYASPYSNGYASPYNNHGCASPCNYGYASPYNYNKK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0753 342 MobiDBLite consensus disorder prediction 143 163 - -
Aed2g0753 342 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 273 - -
Aed2g0753 342 SUPERFAMILY DNA-binding domain 41 97 IPR016177 GO:0003677
Aed2g0753 342 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Aed2g0753 342 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Aed2g0753 342 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Aed2g0753 342 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Aed2g0753 342 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Aed2g0753 342 MobiDBLite consensus disorder prediction 1 33 - -
Aed2g0753 342 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Aed2g0753 342 MobiDBLite consensus disorder prediction 8 33 - -
Aed2g0753 342 CDD AP2 40 96 IPR001471 GO:0003700|GO:0006355
Aed2g0753 342 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0753 Aed-Chr2 5506324 5507352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0753 40 96 AP2-EREBP Transcription Factor Family AT5G19790 73.684 1.93e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed2g0753 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0753 K09286 - gmx:100799444 410.994