Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0739 ATGAGTTTTGGGGGTCTTTTAGACAACAAATCAGGTAGTGGCGGTGCCAGAAACAACGTTTCAGATATTCCTTACAACAACAACAACAACAACAACGTTATTACCACTACCAACAACAACGATAGAATAATGCCCTTTGGTGCAATCTCTCAGCCACGCCTCGTGACCACAACTCCCACTTTGGCCAAATCCATGTTCAACTCTCCGGGGCTGTCTCTGGCACTTCAGCAAACAAATATAGATGGACAAGAAGACGTGAATAGAATGGCCGAGAATAACTTCGAATTACCGAACGGTTTGAGAAGAAACCGCGAAGATGAACACGAAAGCAGATCTGGCAGCGACAACATGGACGGCGCTTCCGGCGACGAACACGACGCCGCCGACAACCCTCCGAGGAAAAAACGCTATCACCGACACACCCCTCAGCAGATACAAGAACTTGAATCGTTGTTTAAGGAGTGTCCTCATCCAGATGAGAAGCAAAGACTCGAACTGAGTAAAAGGCTGTGCTTGGAAACTCGACAGGTTAAATTTTGGTTCCAAAATCGTCGAACCCAAATGAAGACCCAGTTGGAGCGGCACGAGAACACGTTGCTGAGACAAGAGAACGACAAGCTGAGAGCGGAGAATATGTCCATAAGAGACGCAATGAGGAGCCCCATGTGCTCCAATTGCGGCGGCCCAGCCATCATCGGCGAGATTTCGCTGGAGGAGCAGCACCTCCGCATCGAGAACGCGCGTCTCAAAGACGAGCTTGACCGCGTGTGTGCACTCGCGGGCAAGTTTCTGGGACGCCCCGTTTCGTCGCTACCGAATTCAAGCTTGGAGCTTGGCGTCGGAGGAGGGAACGGATTTGCTGGAATCACCACGACATTGCCTCTGGGCCAGGATTTTGCGATGGGGATGTCGGTTTCGATGCCAAACAATCCCCTCGCGATGATCTCGATCTCTTCACCGAGTACGAGGCCGGCCGCATTGTCTGTGACCGGGCTCGACCGGTCGGTGGAGAGGTCGATGTTTCTTGAGCTCGCATTGTCCGCAATGGATGAGCTCGTGAAGATGGCCCAGACTGAGGAGCCTCTTTGGATGAGGAATGTCGAAGGAGGGAGGGAAATTATGAACCATGAGGAGTACGTGAGGAGTTTCACTCCTTGCATTGGTTTGAGACCCAATGGGTTTGTTTCTGAAGCCTCTAGGGAAAATGGAATGGTCATCATTAACAGCTTGGCACTTGTTGAAACTCTTATGGACTCGAATCGATGGGCGGAGATGTTTCCTTGTATAATTGCAAGAACCTCGACCACGGAAGTGATATCTAGTGGAATAAACGGGACAAGAAATGGGGCACTTCAATTAATGCATGCTGAACTTCAAGTTCTATCGCCTTTGGTTCCGGTTCGTGAGGTGAATTTTCTACGGTTTTGCAAGCAGCACGCAGAAGGGGTGTGGGCTGTGGTGGATGTGTCCATTGATAGCATCAGAGAAAGTTCGGGTGCACCCACTTTTGTGAACTGTAGGAGGCTTCCTTCTGGTTGCGTGGTGCAAGATATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGAAGAGAGCCAAGTTCACCAGCACTATAGGCCATTGTTGTGCTCAGGGATGGGGTTTGGTGCCCAACGTTGGGTGGCTACTCTCCAACGCCAATGCGAGTGCCTTGCAATTCTAATGTCCTCGGCTGCACCCTCTAGAGACCATTCCGCAATAACAGCGGGGGGAAGGAGGAGCATGCTGAAGCTAGCGCAGCGGATGACGAACAACTTCTGCGCCGGTGTGTGCGCGTCGACGGTGCATAAGTGGAACAAGCTCAACGCCGGCAACGTGGACGAGGACGTGAGGGTGATGACGCGGAAGAGCGTCGACGACCCGGGGGAGCCTCCGGGGATCGTGCTCAGCGCCGCCACCTCCGTCTGGCTCCCCGTCTCCCCCAACAGGCTCTTCGATTTCCTCCGCGACGAGCGCCTACGCAGCGAGTGGGACATACTCTCCAACGGCGGCCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCACGGCAATTGCGTCTCTCTCCTTAGGGCCAGTGCGATAAATTCCAACCAGAGTAGCATGCTGATACTGCAAGAGACATGCATAGACGCGGCGGGGTCGCTTGTGGTGTACGCGCCGGTTGATATCCCAGCCATGCACGTGGTCATGAACGGCGGCGATTCGGCTTACGTGGCGTTGTTGCCATCAGGGTTCGCGATTGTCCCCGACGGGCCCGGGTCTCGTGGGCCTCAGAACGGGCCCACTCCCGCAACTAACGGCGACGATAACGGCGTGACGCCGCGTGTGAGTGGGTCCCTCCTAACGGTGGCGTTTCAGATCCTTGTGAATAGTCTCCCTACGGCGAAGCTCACGGTAGAGTCCGTGGAAACCGTGAACAACCTCATCTCGTGCACGGTTCAGAAGATCAAAGCCGCGCTCCACTGCGAAAGTTAA 2514 0.5402 MSFGGLLDNKSGSGGARNNVSDIPYNNNNNNNVITTTNNNDRIMPFGAISQPRLVTTTPTLAKSMFNSPGLSLALQQTNIDGQEDVNRMAENNFELPNGLRRNREDEHESRSGSDNMDGASGDEHDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRSPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSLPNSSLELGVGGGNGFAGITTTLPLGQDFAMGMSVSMPNNPLAMISISSPSTRPAALSVTGLDRSVERSMFLELALSAMDELVKMAQTEEPLWMRNVEGGREIMNHEEYVRSFTPCIGLRPNGFVSEASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQHYRPLLCSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPNRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPQNGPTPATNGDDNGVTPRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0739 837 Coils Coil 185 217 - -
Aed2g0739 837 MobiDBLite consensus disorder prediction 763 786 - -
Aed2g0739 837 MobiDBLite consensus disorder prediction 12 33 - -
Aed2g0739 837 CDD START_ArGLABRA2_like 338 566 - -
Aed2g0739 837 MobiDBLite consensus disorder prediction 98 133 - -
Aed2g0739 837 SUPERFAMILY Homeodomain-like 117 191 IPR009057 -
Aed2g0739 837 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Aed2g0739 837 MobiDBLite consensus disorder prediction 1 33 - -
Aed2g0739 837 SMART START_1 343 567 IPR002913 GO:0008289
Aed2g0739 837 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 79 834 - -
Aed2g0739 837 Gene3D - 120 207 - -
Aed2g0739 837 SUPERFAMILY Bet v1-like 595 830 - -
Aed2g0739 837 CDD homeodomain 133 191 IPR001356 GO:0003677
Aed2g0739 837 SUPERFAMILY Bet v1-like 336 567 - -
Aed2g0739 837 Pfam Homeodomain 134 189 IPR001356 GO:0003677
Aed2g0739 837 MobiDBLite consensus disorder prediction 771 786 - -
Aed2g0739 837 Pfam START domain 343 567 IPR002913 GO:0008289
Aed2g0739 837 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 79 834 IPR042160 -
Aed2g0739 837 SMART HOX_1 132 195 IPR001356 GO:0003677
Aed2g0739 837 ProSiteProfiles START domain profile. 334 570 IPR002913 GO:0008289
Aed2g0739 837 MobiDBLite consensus disorder prediction 93 141 - -
Aed2g0739 837 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0739 Aed-Chr2 5327883 5334680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0739 1 837 Homeobox Transcription Factor Family AT3G61150 64.650 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed2g0739 START 2.9e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0739 K09338 - gmx:100811873 1517.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0739 2 5327883 5334680 Aed2g0739 2 5327883 5334680 ECH
Aed2g0739 2 5327883 5334680 Aed3g0773 3 5459491 5466621 ECH