Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0738 ATGAATATGATGAGAAGGTTGAAGAGCATTGCTTCTGGGAGGACTTCCATTTCTTCAGATCCTGGAGGGGATTCTAACTCAAAAAGAGCCAAGTTTGAACCAGAAAGTGAAGTGAAGACTGATGAGAAAACAAATACCATTGAGACAATCTGCAAAGATCAGGAGCAGCATATAGATGCAACTAAAGAAACTCCCAACATAGTAGGCACATCTGATGTATCTACAGTAGCTAGAACTGAGAAGGCAGGTTTTGAGGAGCTTCCAAAAGAATTAAATGAAATGAAAATTAGAGATGAGAAGAGCAAAAACAACAATGAGAAGGATATAGAAGCAACTGTAGTGAGTGGTAATGGAACAGAAACAGGTCAAATAATTACAACTGCAATTTGTGGTCGAGATGGACAACCAAAGCAGACAATCACTTACATGGCTGAACGTGTGGTTGGGACTGGTTCTTTTGGTATTGTTTTTCAGGCTAAGTGCCTTGAAACTGGCGAATCTGTTGCCATAAAGAAGGTGTTGCAAGACAGGAGATACAAGAATAGGGAACTCCAGGTTATGCGCACAGTTGACCATCCTAATGTTGTTAAACTAAAGCACTATTTCTTTTCAACTACCGAGAAAGATGAATTGTACCTTAACCTGGTTTTGGAGTATGTACCTGAAACTGTCTACAAAGTTTCTAAGCACTATGTTAGGATGCACCAACACATGCCCATCATTTATGTGCAATTGTATACCTACCAGGTAAATTCACAGATGCATCAGTTAAAGATATGTGATTTTGGAAGTGCAAAAGTGTTGGTTCCTGGTGAACCCAACATATCATACATTTGCTCTCGATATTATAGAGCTCCAGAACTTATATTTGGGGCAACTGAATACACAACTGCTATTGATATGTGGTCTGTTGGTTGTGTTTTAGCTGAACTACTCCTAGGACAGCCATTGTTTCCTGGTGAGAGTGGGGTTGATCAGTTAGTAGAGATCATTAAGATCTTGGGAACACCCACCAGAGAAGAGATAAGGTGCATGAATCCAAACTACAATGAATTTAAGTTTCCTCAGATTAAAGCTCACCCATGGCACAAGGTTTTTCACAAGAGAATGCCACCTGAAGCTGTGGATCTTGTGTCAAGGCTGCTGCAATATTCACCAAATCTACGATGCACTGCTTTGGCTGCATGTTCTCATCCCTTCTTTGACGATCTGCGGGACCCGAATGCATCCTTGCCGAACGGGCGACCACTACCTCCTTTGTTCAACTTCACATCGCAAGAACTGGCTAATGCACCTGAAGAGTTGCGTCAACGCCTCATTCCTGAGCATGCAAGGAGTTGA 1341 0.4161 MNMMRRLKSIASGRTSISSDPGGDSNSKRAKFEPESEVKTDEKTNTIETICKDQEQHIDATKETPNIVGTSDVSTVARTEKAGFEELPKELNEMKIRDEKSKNNNEKDIEATVVSGNGTETGQIITTAICGRDGQPKQTITYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQVMRTVDHPNVVKLKHYFFSTTEKDELYLNLVLEYVPETVYKVSKHYVRMHQHMPIIYVQLYTYQVNSQMHQLKICDFGSAKVLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIRCMNPNYNEFKFPQIKAHPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTALAACSHPFFDDLRDPNASLPNGRPLPPLFNFTSQELANAPEELRQRLIPEHARS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0738 446 CDD STKc_GSK3 137 404 IPR039192 -
Aed2g0738 446 PANTHER SHAGGY-LIKE KINASE 6 250 - -
Aed2g0738 446 PANTHER SHAGGY-LIKE KINASE 250 446 - -
Aed2g0738 446 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 250 - -
Aed2g0738 446 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 250 446 - -
Aed2g0738 446 SUPERFAMILY Protein kinase-like (PK-like) 141 428 IPR011009 -
Aed2g0738 446 MobiDBLite consensus disorder prediction 9 25 - -
Aed2g0738 446 MobiDBLite consensus disorder prediction 26 45 - -
Aed2g0738 446 ProSiteProfiles Protein kinase domain profile. 142 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0738 446 MobiDBLite consensus disorder prediction 1 45 - -
Aed2g0738 446 Gene3D Phosphorylase Kinase; domain 1 127 221 - -
Aed2g0738 446 Pfam Protein kinase domain 254 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0738 446 Pfam Protein kinase domain 142 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0738 446 Gene3D Transferase(Phosphotransferase) domain 1 222 445 - -
Aed2g0738 446 ProSitePatterns Protein kinases ATP-binding region signature. 148 172 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0738 Aed-Chr2 5312256 5317280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0738 146 437 MAP Kinase Gene Family AT3G59790 31.790 1.83e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aed2g0738 Pkinase 5.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0738 K00924 - gmx:100811346 845.114