Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0727 ATGCCTCGTGGAACTCTTGAAGTTGTTCTGATCAGTGCCAAAGGCATCGATGACAATGATTTTCTCTCTAGCATAGATCCTTATGTGATTCTCACATACAGGGCACAGGAGAAAAAGAGCACTGTGCAAGAAGATGCTGGATCCAAGCCACAATGGAATGAGAGCTTTCTTTTCACTGTCTCTGACAGTGCTTCTGAACTTATTCTAAAGGTGATGGATAAAGACAACTTTAGTCAGGATGATTGTCTTGGCGAGGCAACCATTCATTTAGATCCAGTGTTTGAAGCTGGTAGCATTCCAGAAACTGCTTACAAGGTTGTGAAGGATGAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTTACTGCTGAGAAAAATGAGGAGCAGGATTACTATGCTGCAACTGAAGAGAGCTATGGTGGATGGAAAGAATCGAATGAGGAATATTGA 453 0.4194 MPRGTLEVVLISAKGIDDNDFLSSIDPYVILTYRAQEKKSTVQEDAGSKPQWNESFLFTVSDSASELILKVMDKDNFSQDDCLGEATIHLDPVFEAGSIPETAYKVVKDEEYCGEIKVALTFTAEKNEEQDYYAATEESYGGWKESNEEY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0727 150 SMART C2_3c 5 102 IPR000008 -
Aed2g0727 150 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 150 - -
Aed2g0727 150 Pfam C2 domain 4 97 IPR000008 -
Aed2g0727 150 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Aed2g0727 150 Gene3D C2 domain 2 124 IPR035892 -
Aed2g0727 150 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Aed2g0727 150 PANTHER C2 DOMAIN-CONTAINING 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0727 Aed-Chr2 5257264 5259854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0727 4 127 C2H2 Transcription Factor Family AT4G21160 31.452 4.61e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0727 - - gmx:100500006 281.182