Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0715 ATGACGAACAACAATGGTGGCTTTGACTCTAAGGTTGAGGAGGAGGCACTGTTTTGGCCGTACCCTTGGCTGCAAGAGTCCTCGGAGTGGGACAACACCCTCCTCATTGATCAACAAATTCCTCTCCCATCATCCAACACCGCCGCCACCGCTACTCACGTTCCTGCAATGATGCTGTCTCCGCCGGCAGAGGATGTCGTCCTCAATCACTTTCAAGATCAATTGCCACCGCAACAACAACAGCACAACATTAATGGCGCCAACAACGACTACTCTCATTATCACCCGCACGCACCAGCGGAGGCGGAGCTGTTGTTGCCAGGCACCCAAACCAATCACGGCGGCACTTTGTCGTCGAAGTCCAAGTGCAAGAGATGGAGTGAAGCAGAACACAGGTTATTTCTGATAGGGCTTGAGATGCATGGAAGGGGAGATTGGATCAACATTGCCAAAATCATCAAGACACGAACTCCAGCTCAAGTTGCAAGCCATGCTCAAAAGTATTTCATTCGCCAGAGCTCGCCCAACAAAGGAAAAAGAAGAAGCATTCATGACACAGTACTTTTCCCTCTCCCTCACTACATTCATCGACATCAACAGAATGATGAGCTTGTTCCTCTTCTTCCAAACCCTATCAGTGTCCCTCACCACATTCACCAGCAGAATGAATGGGCTTCTTCCTTTTCAAGTTTCCTGCCTCACTCAACTTTGCCTAAACTCTGA 723 0.4924 MTNNNGGFDSKVEEEALFWPYPWLQESSEWDNTLLIDQQIPLPSSNTAATATHVPAMMLSPPAEDVVLNHFQDQLPPQQQQHNINGANNDYSHYHPHAPAEAELLLPGTQTNHGGTLSSKSKCKRWSEAEHRLFLIGLEMHGRGDWINIAKIIKTRTPAQVASHAQKYFIRQSSPNKGKRRSIHDTVLFPLPHYIHRHQQNDELVPLLPNPISVPHHIHQQNEWASSFSSFLPHSTLPKL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0715 240 Gene3D - 124 174 - -
Aed2g0715 240 ProSiteProfiles SANT domain profile. 121 173 IPR017884 -
Aed2g0715 240 SUPERFAMILY Homeodomain-like 121 173 IPR009057 -
Aed2g0715 240 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 125 172 IPR006447 GO:0003677
Aed2g0715 240 PANTHER TRANSCRIPTION FACTOR KUA1 101 193 - -
Aed2g0715 240 Pfam Myb-like DNA-binding domain 124 169 IPR001005 -
Aed2g0715 240 SMART sant 122 171 IPR001005 -
Aed2g0715 240 ProSiteProfiles Myb-like domain profile. 118 169 IPR001005 -
Aed2g0715 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 173 IPR017930 -
Aed2g0715 240 CDD SANT 125 169 IPR001005 -
Aed2g0715 240 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 101 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0715 Aed-Chr2 5156254 5157061 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g0715 Myb_DNA-binding 5.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0715 - - gmx:121173128 152.91