Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0705 ATGGGAAGGAAGCCATGTTGTGACAAGAAAATGGGGTTGAAGAAGGGTCCATGGAGTGGTGAAGAGGATGAGATTCTTGTTGATTATATCAACAAAAATGGTGGTCATGGAAGTTGGCGTTCTCTCCCCAAGTTAGCAGGTCTACCTCGTTGTGGTAAGAGTTGCAGGCTAAGATGGACAAACTACCTCAGACCAGATATCAAACGTGGTTCCTTTACACTTGAGGAAGAAAAACTAATCACACAGCTTCATGCTATCCTTGGAAATAGAAGAAGTGTCAATGGTCTAGTTCTTGTCTTGCAACTCTCAACCCTCTTTTATTAA 324 0.4228 MGRKPCCDKKMGLKKGPWSGEEDEILVDYINKNGGHGSWRSLPKLAGLPRCGKSCRLRWTNYLRPDIKRGSFTLEEEKLITQLHAILGNRRSVNGLVLVLQLSTLFY 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0705 107 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Aed2g0705 107 CDD SANT 17 63 IPR001005 -
Aed2g0705 107 PANTHER TRANSCRIPTION FACTOR MYB104-RELATED 1 92 - -
Aed2g0705 107 SMART sant 14 65 IPR001005 -
Aed2g0705 107 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 67 IPR017930 -
Aed2g0705 107 Gene3D - 12 69 - -
Aed2g0705 107 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Aed2g0705 107 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 92 - -
Aed2g0705 107 SUPERFAMILY Homeodomain-like 16 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0705 Aed-Chr2 5101757 5102897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0705 1 90 MYB Transcription Factor Family AT3G61250 81.111 4.07e-48 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g0705 Myb_DNA-binding 8.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0705 K09422 - gmx:100788528 174.481