Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0694 ATGGATCGAGGGGACCAAATGACACTACCTGGCTCTGCATCATACTATATGCAGAGAGGAATACCTGGTGCTGGAACTCAACCTGAACTGCACAATTCGCCTAATATTCGACCATTGTCTAATCCGAATCTACCGTTTCAATCAAGCATCGGTGGCGGCGGTGGTAACATTGGATCTACATTACCATTGGAGTCTTCAGGAATTTCAGCTCCGTGTGTCAATGTGAGTGCTCCTTCCGGGGTCGTGCCAGGGGAATCTGTTAAAAGGAAGAGAGGAAGGCCTAGAAAATATGGCCCCGATGGAGCTGTGTCGTTGGCGTTGACCCCAACTCCGGCCAGTCATCCTGGAGCCTTGGGACAAGGCCAGAAACGGGGCAGAGGGCGCCCGCCCGGGTCTGGGAAGAAACAGCAGTTGGCTTCACTTGGTGAATTGATGTCTGGTTCAGCTGGGATGGGTTTCACTCCTCATATCATCACCATTGCAATTGGAGAAGACATTGCAACAAAAATCATGGCATTTTCTCAGCAGGGGCCTAGAGCTATATGTATTTTATCAGCCAATGGTGCTGTCTCTACTGTGACACTTCGTCAGCCTTCAACATCAGGCGGCACTGTCACATATGAGGGGCGTTTTGAGATTGTGTGCCTGTCAGGCTCTTACTTGGTTGCCGATAGTGGTGGTGGCTCCCGCAATCGAACTGGTGGATTAAGTGTTTCACTTGCAAGTCCTGATGGCCGTGTCATCGGTGGAGGAGTTGGCGGAATGCTTATTGCCGCAAGTCCAGTTCAGGTGATACTTGGGAGCTTTACATGGGGTGCATCAAAGACGAAGATCAAGAAAAAAGAAAGTTCAGAAGGTGCAGAACTTGCTATAGAGACTGATCATCATCAGACAGTTCACAATCCAGTCGCAGTCAATAGCATTTCCCCAAATCAAAATCTTACTCCAAACTCATCTCTAAGTCCCTGGCCTGCATCGCGACCATTGGATATGCGCAACTCCCATATCGACATTGATTTAATGCGCGGGTGA 1032 0.4932 MDRGDQMTLPGSASYYMQRGIPGAGTQPELHNSPNIRPLSNPNLPFQSSIGGGGGNIGSTLPLESSGISAPCVNVSAPSGVVPGESVKRKRGRPRKYGPDGAVSLALTPTPASHPGALGQGQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITIAIGEDIATKIMAFSQQGPRAICILSANGAVSTVTLRQPSTSGGTVTYEGRFEIVCLSGSYLVADSGGGSRNRTGGLSVSLASPDGRVIGGGVGGMLIAASPVQVILGSFTWGASKTKIKKKESSEGAELAIETDHHQTVHNPVAVNSISPNQNLTPNSSLSPWPASRPLDMRNSHIDIDLMRG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0694 343 MobiDBLite consensus disorder prediction 74 138 - -
Aed2g0694 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 275 - -
Aed2g0694 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 319 - -
Aed2g0694 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 319 IPR039605 GO:0003680
Aed2g0694 343 ProSiteProfiles PPC domain profile profile. 149 292 IPR005175 -
Aed2g0694 343 MobiDBLite consensus disorder prediction 306 324 - -
Aed2g0694 343 MobiDBLite consensus disorder prediction 1 58 - -
Aed2g0694 343 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Aed2g0694 343 SMART AT_hook_2 88 100 IPR017956 GO:0003677
Aed2g0694 343 MobiDBLite consensus disorder prediction 306 328 - -
Aed2g0694 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 270 IPR005175 -
Aed2g0694 343 CDD DUF296 154 269 IPR005175 -
Aed2g0694 343 Gene3D - 155 299 - -
Aed2g0694 343 MobiDBLite consensus disorder prediction 28 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0694 Aed-Chr2 5040694 5046263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0694 1 343 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.693 1.12e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0694 - - gmx:100799791 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0694 2 5040694 5046263 Aed2g0694 2 5040694 5046263 ECH
Aed3g0641 3 4559275 4564434 Aed2g0694 2 5040694 5046263 PCT