Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0664 ATGCAGTCATTTCAACAGCAACTGCTTAGAAAACCAGAAGGGAATGAAGCTTATTTAGCTTATCAAGCGGGGATTCAAGGGGTATTTGGGAGTAACAATTTCTCATCTCCTAGTGCCATGCAACTACCTCAGCAGCCTCGAAAATTGCATCTTGGTTCCAACCAGGATACCCAGCTAAGGGGTCCAGGTATTGAGCAGCAAATGCTAAATCCTGTCCATCAAGCATACCTTCAATATGCTCTCCAGGCTGCACAACAAAAGCCTACTTTAGGAATTCAGTCACAGCAGCAAACTAAAATGGGAATGTTAAGCTCTGCATCTCTGAAGGATCAGGAGATGCGTATGGGAAATTTGAAAATGCAGGACATTATGTCTATGCAGGCAGCAAATCAAGGTCAAGGATCATCCTCTAGGAATTCATCTGAGCTTGTTGCTCGTGGGGACAAGCAAATGGAGCAAGGACAACAAATAGCACCTGATCAGAAGAGTGAAGGAAAGCCTTCAACCCAGGGATCAACCATTGGACATTTAATTCCTGGAAATATGATAAGACCCATGCAAGCACCAGAAACACAGCAGGGCATCCAAAATGTTGTAAACACCCAGATTGCAGTATCTGCTCAATTGCAGGCTATGCAGGCATGGGCACGTGAACGTAATATTGATTTATCACATCCTGCAAATGCACACATAATGGCTCAGCTCATTCCACTGATGCAGTCAAGGATGGTCGCACAATCAAAGGTCAATGAGAGCAACATTGGTGCTCAGTCATCACCTGTCTCTGTTTCAAAGCAGCAGGTTACTTCTCCAGCAATTGCAAGTGAGAGCTCAGCACATGCTAATTCATCCAGTGACATGTCTGGGCAGTCAGGTTCTTCAAAAGCCAGGCAGACAGTTCCACCCAGCCATCTTGGCTCAACAACTAATGCTAGTATGGCTGGTAACTCGAGTGACATGGCAACACAGCAATTCCATGTTCATGGTAGAGAGTCTCAAGCTCCTCCGAGGCAACCAGTAGTAGTTGGAAATGGTATGCCCTCTTTGCATTCTCAGCAGTCTTCTGCCAGCATGAGCTTAGGAGCAAACCATCCTTCGAATGCAAAAACTTCATCATCTGGTCCAGAACCTCCTCAAATGCAGTACATCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAAATCCAACAAATAAAGGGGGTTCAGGAAATCATGCCAAATCTCAAGGGCCACCAGCTCAGATGCCTCAGCCACGAAGCAATTTTACAAAGCAACAGCTACATGTTCTGAAAGCACAGATACTAGCATTTAGGCGGCTGAAGAAAGGAGAAGGTACTCTGCCTCAAGAACTTCTTCGGGCTATTGTTCCACCACCCTTTGAGATGCAGGTGCAACAGCCAAATCATGCTGCTGGGGGACAAAACCAAGACAAATCTGCTGGAAATATTGTGGCAGAACAAGTAAGCCCAATTGAGTCCAATGCCAAGGAGTCACAGTCTATCCCTGGTATTAGTGGTCAGAGTTCTTTAAAGCAGGAATCCTTTGCAAGAGAAGAGAAATCTGTTATTCCCCCAGTTAATGTTCAAGCTGTTGTGCCACTTGTGTCAAAGGAATCTGCCCCAACGTTTTCTGCAGGAAAGGAAGAGCAGAAATCAATTGGAAGCTCTGTTAAGTCAAACCAGGATGGTGACCGTGTAGATAATACTACTGTTAGAAATGAGTTAGCATTAGATAGGGGGAAGGCTGTTGCACTGCAGGCTCCTGTATTCGACACATTGCAAATTAAGAAACCCGCACAAATGAGCACTGTTTCCCAGCCAAAGGATGCGGGATCAACTAGAAAATATCATGGACCTCTATTTGATTTTCCTTTCTTTACTAGGAAACATGACTCCTTTGGGTCATCAATGATGCTAAACAACAACAATAACTTGTCACTGGCATATGATGTCAAAGATCTTCTTTTTGAGGAAGGCATGGAAGTACTTAACAAGAAAAGGACAGAAAATTTAAAGAAGATTGAAGGTTTATTGGCAGTAAACTTAGAGAGGAAAAGAATTAGGCCAGATCTTGTGCTGAGGCTGCAAATTGAAGAGAAAAAGCTTCGCCTAGTAGATCTTCAGGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGAAAGGCCATATCGCAAGTTTGTTAGGCTGTGTGAACGTCAGCGCATGGAACTTGCTAGACAAGTGCAGGCATCTCAGAGAGCAGTAAGGGAGAAGCAACTCAAATCTATATTTCAGTGGCGTAAGAAGCTTCTTGAGGCCCACTGGGCCATTCGTGATGCCCGTACTGCCCGCAACAGGGGAGTTGCCAAATATCATGAGAAGATGTTGCGAGAGTTCTCAAAACATAAGGATGATGACAGAAATAAAAGGCTGGAAGCCTTAAAAAACAATGATGTTGACAGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATCTCTGGTGATGCTGCAGAGAGATATGCTGTTCTTTCAACTTTCTTAACCCAGACTGAAGAGTATCTACACAAATTAGGAAGTAAGATTACAGCTGCTAAAAATCAACAGGAAGGTCTATCTGAAGAAGAAGTCAGAGCAGCTGCAGCTTGTGCTGGAGAGGAAGTGATGATTAGAAATCGTTTTCTGGAGATGAATGCTCCTAGACACAGTTCATCTGTCAACAAGTATTACAACCTTGCCCATGCTGTGAATGAAACAGTCATAAGGCAACCATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAGTTAAATGGAATTTTGGCGGATGAGATGGGTCTTGGAAAAACTGTACAGGTTATGGCATTGATTGCTTACTTGATGGAATTTAAAGGAAACTATGGCCCACATCTTATAATAGTCCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGTTTTATAATTGGTTGCCATCTGTTTCATGCATTTTTTATGTTGGAACCAAGGATCATCGGTCAAAACTATTTTCCCATGAAGTTTGTGCTATGAAATTTAATGTCCTTGTGACTACTTATGAGTTCATCATGTATGACCGGTCAAAACTTTCAAAAATTGACTGGAAGTATATCATAATTGATGAAGCACAGAGAATGAAGGATAGGGATTCTGTTTTAGCACGTGATCTTGATAGATATCGTTGTCAAAGACGTCTGCTTTTGACAGGAACACCATTACAGAATGATTTGAAGGAACTGTGGTCTCTCTTAAATTTACTTCTTCCTGAAGTTTTCGATAATAAGAAAGCCTTTAATGATTGGTTCTCTAAACCATTTCAAAAGGAAGGTCCCACTCATAATGTAGAGGATGATTGGCTTGAGACAGAGAAGAAAGTTATTATTATCCATCGACTTCATCAGATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTTGAAGATGTTGAAGGCTCACTTCCACCAAAGGTCTCCATAGTTCTAAAATGTAAAATGTCAGCTGTCCAGAGTGCAGTTTATGACTGGGTCAAATCAACTGGTACCCTTCGTCTTGATCCTGAGGATGAGAAACACAAGCTTCAGAGAAATCCAGCTTACCAGGTGAAGCAATATAAAACTTTAAACAACAGATGCATGGAGCTGCGTAAGACTTGCAATCATCCATTGCTTAATTACCCATTCTTCAGTGACCTATCTAAGGAGTTCATTGTAAGATCCTGTGGGAAATTGTGGATCCTGGATAGGATCCTCATAAAACTTCAAAGAACTGGACATCGAGTTCTACTTTTTAGTACCATGACAAAACTTCTAGACATCTTGGAAGAATATCTACAGTGGCGAAGACTTGTTTATAGAAGAATTGATGGGACAACTAGTTTGGAAGACCGTGAATCAGCGATAATGGACTTCAATAGCCCTGATTCAGATTGTTTCATCTTCCTGCTCAGTATTCGAGCTGCCGGAAGGGGCCTTAACCTTCAGACTGCTGACACAGTTGTCATTTATGATCCTGATCCAAACCCTAAAAATGAGGAGCAGGCTGTGGCCAGAGCTCATCGTATTGGACAGAAAAGAGAAGTCAAAGTTATTTACATGGAAGCTGTTGTTGACAAAATCTCTAGTCATCAGAAGGAGGATGAACTGAGGAGTGGAGGCACCGTTGATATGGAGGATGAACTTGCAGGTAAGGATCGCTACATGGGTTCCATTGAGAGCCTCATAAGGAACAATATTCAACAATATAAGATAGAAATGGCTGATGAGGTTATTAATGCTGGACGGTTTGATCAAAGAACTACACATGAAGAGAGGCGTTTGACTTTGGAGACATTATTACATGATGAAGAAAGGTATCAAGAAACTGTCCATGATGTTCCTTCACTACAGGAGGTAAATCGCATGATTGCTAGGAGTAAAGAGGAAATTGAACTGTTTGATCAAATGGATGATGAACTTGATTGGATTGACGAGATGACACGATTTGATCACGTGCCTAAGTGGCTTCGAGCCAATACAAGAGAAGTAAATGCTGCTGTTGCTGCTCTGTCAAAAAGACCATCAAAGAACACTTTATTGGGTGGTAGTATTGGCATGGAATCAAATGAAATTGGTTCTGAAAGAAAAAGAGGACGACCCAAGGGGAAAAAACATCCTAATTATAAAGAGTTGGATGATGAAATTTTGGAATACTCTGAAGTAAGCTCTGATGAAAGAAATGAATATGCACATGAAGAAGGAGAAGTAGGAGAATTTGATGATGATGGGTATAGCATGGCTGATGGAGCTCAGACCATTGATAAAGATCAACTGGAAGATGGTCTGCTTTGTGATGCTAGATATGAATTTCCTCAATCTTTAGAAAGTGCTAGAAATAATCAAATTGTTGAAGAAGCTGGATCCTCAGGATCGTCCTCAGACAGTCAAAGATTGAAACAAATAGTATCACCATCCATCTCCTCTCAGAAATTTGGTTCCCTATCTGCATTAGATGCTCGACCAGGTTCCATTTCAAAAAGGATGACAGATGAGTTAGAGGAAGGGGAAATTGCAGTATCTGGTGATTCTCACATGGACCATCAGCAGTCTGGAAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAACAAGTTTTGCAGAAACCGAAGATTAAGCGTAAACGCAGTCTTCGTGTTCGGCCCCGTCATGCCACTGAAAGACCTGAAGAAAAATCTGGTAGTGAAATGGCATCTCATTTAGCAGTCCAAGCAGACCACAAATATCAAGCGCAACTGAGGACTGACCCAGATTCCAAATTATTTGGTGACTCCAATGCCAGCAGGCATGAACAAAACACACCATCGTTAAAAAATAAGCGAACCTTACATTCAAGGAGAGTAGCTAATCCATCCAAATTACATGGACCTCCAAAGTCAAGTCGTTTGAATTGCATGTCTGTGCCTTCACAAGATGGTGGTGAACACTCCAGAGAAAGCTGGGAAGGGAAACCTATCAATTCAAGTGGGTCTTCAGCACATGGCACTAAGATGACTGAAATTATCCAGAGAAGGTGCAAAAATGTAATTAGCAAGCTCCAAAGGCGAATAGACAAGGAAGGCCATGAAATTGTACCTTTGTTAACGGATTTGTGGAAGAGAATTGAAAATTCTGGATCTGGAAACAGCCTGTTAGACCTGCGAAAGATTGATCAACGGATTGATAAATTTGAGTATAATGGAGCAACCGAGCTTGTATTTGATGTGCAGTTCATGTTGAAGAGTGCAATGCAATTTTATGGTTTTTCACATGAGGTAAGAACTGAGGCAAGAAAGGTTCATGATCTCTTTTTTGATATCTTGAAAATTGCATTTCCTGATACGGACTTCCGAGATGCAAGAAGTGTGCTTTCTTTCTCCAGTCAAGCTGCTGCCGGTACAGTAACATCCCCAAGGCAAGTGGCTGTCAGCCAAAGCAAGAGGCACAGGCTGATAAACGAGGTGGAAACTGAGTCATACCCTGCGCAGAGGTCACTGCAACATGGATCAGCTTCCAGCGGTGAAAACACCAGAATTAAAGTCCATTTGCCACAGAGGGAATCAAGAACTGGAAGTGGTGGGGGCAGCAGCACCAAGGAGCAACAACAGCAGGATGATTCTTTGCTGCTTGCGCATCCAGGTGATCTAGTTGTATGCAAGAAGAGAAGAAATGACAGGGAGAAATCCTTGGTGAAACCTAAAACCGGTCCCAGTCCCAGTCCCGGTCCTGTTTCACCATCTAGCATGAGAACTCCAGGGTCAGGTGCAGTCCCCAAGGATGCTAGATTAACTCAACAGGGTTCCCATGCACAAGGCTGGTCTGGGTCTGGCCAGCCATCTCAACAAACAAATGGATCTGGTGGGTCTGTTGGCTGGGCAAACCCTGTAAAGAGGCTAAGAACAGATTCTGGGAAGAGAAGACCAAGCCATACATAG 6501 0.4272 MQSFQQQLLRKPEGNEAYLAYQAGIQGVFGSNNFSSPSAMQLPQQPRKLHLGSNQDTQLRGPGIEQQMLNPVHQAYLQYALQAAQQKPTLGIQSQQQTKMGMLSSASLKDQEMRMGNLKMQDIMSMQAANQGQGSSSRNSSELVARGDKQMEQGQQIAPDQKSEGKPSTQGSTIGHLIPGNMIRPMQAPETQQGIQNVVNTQIAVSAQLQAMQAWARERNIDLSHPANAHIMAQLIPLMQSRMVAQSKVNESNIGAQSSPVSVSKQQVTSPAIASESSAHANSSSDMSGQSGSSKARQTVPPSHLGSTTNASMAGNSSDMATQQFHVHGRESQAPPRQPVVVGNGMPSLHSQQSSASMSLGANHPSNAKTSSSGPEPPQMQYIRQLNQSAPQAGNPTNKGGSGNHAKSQGPPAQMPQPRSNFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIVPPPFEMQVQQPNHAAGGQNQDKSAGNIVAEQVSPIESNAKESQSIPGISGQSSLKQESFAREEKSVIPPVNVQAVVPLVSKESAPTFSAGKEEQKSIGSSVKSNQDGDRVDNTTVRNELALDRGKAVALQAPVFDTLQIKKPAQMSTVSQPKDAGSTRKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLSLAYDVKDLLFEEGMEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLVDLQARLRDEIDQQQQEIMAMPERPYRKFVRLCERQRMELARQVQASQRAVREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKHKDDDRNKRLEALKNNDVDRYREMLLEQQTSISGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKNQQEGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRHSSSVNKYYNLAHAVNETVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSEFYNWLPSVSCIFYVGTKDHRSKLFSHEVCAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEGPTHNVEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLKCKMSAVQSAVYDWVKSTGTLRLDPEDEKHKLQRNPAYQVKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIMDFNSPDSDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDMEDELAGKDRYMGSIESLIRNNIQQYKIEMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSKEEIELFDQMDDELDWIDEMTRFDHVPKWLRANTREVNAAVAALSKRPSKNTLLGGSIGMESNEIGSERKRGRPKGKKHPNYKELDDEILEYSEVSSDERNEYAHEEGEVGEFDDDGYSMADGAQTIDKDQLEDGLLCDARYEFPQSLESARNNQIVEEAGSSGSSSDSQRLKQIVSPSISSQKFGSLSALDARPGSISKRMTDELEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQKPKIKRKRSLRVRPRHATERPEEKSGSEMASHLAVQADHKYQAQLRTDPDSKLFGDSNASRHEQNTPSLKNKRTLHSRRVANPSKLHGPPKSSRLNCMSVPSQDGGEHSRESWEGKPINSSGSSAHGTKMTEIIQRRCKNVISKLQRRIDKEGHEIVPLLTDLWKRIENSGSGNSLLDLRKIDQRIDKFEYNGATELVFDVQFMLKSAMQFYGFSHEVRTEARKVHDLFFDILKIAFPDTDFRDARSVLSFSSQAAAGTVTSPRQVAVSQSKRHRLINEVETESYPAQRSLQHGSASSGENTRIKVHLPQRESRTGSGGGSSTKEQQQQDDSLLLAHPGDLVVCKKRRNDREKSLVKPKTGPSPSPGPVSPSSMRTPGSGAVPKDARLTQQGSHAQGWSGSGQPSQQTNGSGGSVGWANPVKRLRTDSGKRRPSHT 2166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0664 2166 MobiDBLite consensus disorder prediction 1539 1611 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 345 420 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 1568 1596 - -
Aed2g0664 2166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1166 1503 IPR027417 -
Aed2g0664 2166 SMART QLQ_2 420 457 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g0664 2166 MobiDBLite consensus disorder prediction 2044 2063 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 128 181 - -
Aed2g0664 2166 CDD SF2_C_SNF 1250 1383 - -
Aed2g0664 2166 Gene3D - 1172 1382 IPR027417 -
Aed2g0664 2166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 914 1162 IPR027417 -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 251 420 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 1700 1761 - -
Aed2g0664 2166 Pfam SNF2-related domain 935 1239 IPR000330 GO:0005524|GO:0140658
Aed2g0664 2166 SMART helicmild6 1289 1373 IPR001650 -
Aed2g0664 2166 Gene3D - 923 1171 IPR038718 -
Aed2g0664 2166 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 944 1109 IPR014001 -
Aed2g0664 2166 PANTHER SNF2/RAD54 HELICASE FAMILY 2 2084 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 1781 1795 - -
Aed2g0664 2166 Gene3D - 1858 2002 IPR036427 GO:0005515
Aed2g0664 2166 MobiDBLite consensus disorder prediction 494 512 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 128 146 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 543 564 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 2071 2087 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 154 176 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 2119 2145 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 1990 2166 - -
Aed2g0664 2166 SMART ultradead3 928 1117 IPR014001 -
Aed2g0664 2166 Pfam QLQ 422 455 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g0664 2166 SMART bromo_6 1857 1968 IPR001487 GO:0005515
Aed2g0664 2166 MobiDBLite consensus disorder prediction 2013 2034 - -
Aed2g0664 2166 Pfam Helicase conserved C-terminal domain 1262 1373 IPR001650 -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 251 329 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 1778 1858 - -
Aed2g0664 2166 Coils Coil 697 721 - -
Aed2g0664 2166 Coils Coil 1479 1499 - -
Aed2g0664 2166 SUPERFAMILY Bromodomain 1908 1969 IPR036427 GO:0005515
Aed2g0664 2166 PANTHER ATP-DEPENDENT HELICASE BRM 2 2084 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
Aed2g0664 2166 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1263 1440 IPR001650 -
Aed2g0664 2166 CDD Bromodomain 1864 1963 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 1712 1733 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 542 567 - -
Aed2g0664 2166 MobiDBLite consensus disorder prediction 494 519 - -
Aed2g0664 2166 ProSiteProfiles QLQ domain profile. 421 457 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0664 Aed-Chr2 4808002 4818872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0664 953 1398 RAD5 or RAD16-like Gene Family AT1G02670 26.692 8.82e-30 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aed2g0664 SNF2_N 6.6e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0664 - - gmx:100807104 3867.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0664 2 4808002 4818872 Aed2g0664 2 4808002 4818872 ECH
Aed3g0610 3 4347088 4356793 Aed2g0664 2 4808002 4818872 PCT