Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0652 ATGGGTTTTCCGGTGGGATACGCGGAGGTGTTCTTCCCGAACCCGTTCCTGCACACGCTCGCCCTCCTCGGACTCCTCCGAAACCTCGTATTCTTCCTCTTCCACCTCCTCGGACTCTCCGATTTCCTCGAAACCGAGGTTGCCTGGCCGGACCCCCGCCCCTCCGACGCCACGGTGTCGGAGCGGACCCCCTCCGTGTCAGCGCTCCTGATCCGGGACCTCCTGCCCGTCGCCAGGTTCGGAGACTCCGACGTTGCGACCGTACAAAACGGCTGCGCGGTGTGCCTGTTCGAGTTCTCCGAGGAGGAAGAGATTCGGTGCATGCGGAACTGCAAGCACATTTTCCACCGCAGCTGCGTGGACCGTTGGATCGACCACGATCAGAAAACGTGCCCTCTCTGTAGGACTCCCCTTGTGCCCGATGATATGCTCGATGACTACAATCAACGCCTCTGGGCTGCTTCTGGGGTCAACGAGTTTTACGCCGACTACACTATTCTTCCTCCTTCTGAATTCTGA 519 0.5973 MGFPVGYAEVFFPNPFLHTLALLGLLRNLVFFLFHLLGLSDFLETEVAWPDPRPSDATVSERTPSVSALLIRDLLPVARFGDSDVATVQNGCAVCLFEFSEEEEIRCMRNCKHIFHRSCVDRWIDHDQKTCPLCRTPLVPDDMLDDYNQRLWAASGVNEFYADYTILPPSEF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0652 172 PANTHER BRH1 RING FINGER PROTEIN 1 164 - -
Aed2g0652 172 ProSiteProfiles Zinc finger RING-type profile. 92 135 IPR001841 -
Aed2g0652 172 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 164 - -
Aed2g0652 172 SUPERFAMILY RING/U-box 85 142 - -
Aed2g0652 172 SMART ring_2 92 134 IPR001841 -
Aed2g0652 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 142 IPR013083 -
Aed2g0652 172 Pfam Ring finger domain 92 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0652 Aed-Chr2 4712839 4713357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0652 1 157 C3H Transcription Factor Family AT1G63840 45.963 2.11e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0652 K16281 - gmx:100790975 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0601 3 4270622 4271128 Aed2g0652 2 4712839 4713357 PCT