Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0651 ATGGGATCTGCCAATGAAGGAGCCTCTTCTTCAGTATGGTCCAACCATGTTTTCGTGAGTTTCAGGGGTGATGACACACGCAAAGGTTTCACAGATCATCTTTTTGCTTCACTAGAGAGAAGTGGGATCAAAACATTCAGAGATGATCATGATCTTGAGAGGGGGAAATTGATATCAATTGAACTCATGAAAGCCATTGAAGAGTCCATGTTTGCTCTCATCATTTTTTCACCAAACTATGCCTCCTCAACATGGTGTTTGGATGAGCTCCAGAAGATTCTAGAGTGCAAGAAAGAAGTTTTTCCAATCTTCTATGGTGTAGACCCCTCTGATGTGAGGCATCAGAGAGGAAGCTTTGCCAAGGCTTTCAGAAAACATGAAGAAAAATTCAGAGAAAACAGAAAGAAGGTGGAAAGATGGAGACATGCCTTGACAGAAGTTGCAAGTTACTCTGGCTGGGACTCCAAGGATGAGCATGAGGCAGCATTGATTGAAACAATTGTTGGACACATACAGAAAAAATTAATTCCTAGATTGCCATGTTGCACACATAACCTTGTTGGGATTGAGTCACGGATGAAAGAAGTGAATTCACTCATGGGAATTCGGTTAAACGATGTTCGCTTCATAGGAATATGGGGCATGGGAGGCATAGGTAAGACAACCATTGCTAGATTAGTCTATGAAGCAATCAAAGAGCAATTCAAGGTTAGTTGCTTTGTTGAAAACATTAGAGAGGTGTCTAAGTCAAATGGCTTAGTTCACATTCAAAAAGAACTTCTTTCTCATCTTAATGTAAGAAGCAGTGATTTTTATAATCTTCATGATGGGGAAAAGATAATAGCAAACTCTTTTAGCAACAAAAGGGTTCTTCTTGTTCTTGATGATGTAAGTGAGTTAAGTCAATTGAAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCAGGAAGCAGAGTAATCGTCACAACCAGAGATAAGCACCTGCTGAAGACACATGGAGTGGATATAACTTGTAAGGCTAGAGGCTTAGCCCAAAATGAAGCCCTTCGGCTCTTTTGTTTGAATGCATTTAAACAAGATCAGCCTAAAGAAGAGTATTTGAATTTGTGCAAAGAAGTGGTTGAATATGCAAGAGGTCTTCCAATAGCACTTGAGGTGTTGGGTTCCCATCTTCATGGAAGAACTGTTGAGGTTTGGCACAGTGCTTTAGAACAAATAAGAAGTTCTCCACACTCCAAAATCCAAGACACACTGAAAATAAGTTATGAAAGTTTGGACTCTACGGAGAAGAAATTGTTTCTAGATATTGCTTGTTTCTTCAAAGGGATGGACATAGATGAAGTGAAAAATATCTTGAAAAATTGTGGTGACCATCCCGAAATCGGAGTTGACATTTTGGTTGAGAGATGTTTGGTAACTCTGGATAGTATTAAGAATAAGTTGGGGATGCATGATTTGCTACAAGAAATGGGTAGGAATATTGTATTTCAAGAATCTCCAAATGATCCTGGCAAACGTAGTAGATTGTGGTCTCAAAAAGACATTGATTATGTATTGACAAAAAACAGGGGAACTGATAAAATTCAAGGCATGGTTCTGAACTTGGTTCAACCATGTGATTATGAAGCGCGCTGGAGCACTGGAGCCTTCTCCAAGATAAGTCAGTTAAGGTTACTAAAGTTATGTGATATGCAGCTTCCTCTTGGCCTCAACTGCCTTTCTAGTGCACTAAAAGTTCTTCATTGGAGAGGATGTCCTTTGAAAGCTTTGCCACTTACTACCAATCAACTTGATGAAATTGTTGATCTCAAATTGTCTCACAGCAAAATTGAACAACTTTGGCATGGAGCAAAGCTTATGGAAAAGCTAAAGACCATCAACTTGAGCTTTTCCAAGAACCTAAAGCGGTCCCCGGACCTTAGTGGGGTTCCAAATCTTGAATCATTGGTTCTTGAAGGTTGCATAAGTTTGACTGAGGTTCATCCATCCCTTGTACACCATAAGAAACTTGCTATGATGAATTTGAAAGACTGCAAAAGGCTCAAAACCCTTCCAAGTAAAATGGAGATGAATGCCTTGAAAGATTTAAATCTTTCTGGTTGCTCTGAATTTAAGTATCTTCCAGAGTTTGGAGAAAGCATGGAACATTTCTCAGAGCTTTCTTTAGAGGGGACTGCTATATCAAAACTACCCTTATCACTGGGATGTCTAGTTGGCCTTGCTCATTTGTATTTGAAGAATTGCAAAAATCTTGTTTGCCTTCCAGATACCATTCATAAATTGAAGTCCCTCAAAGTTCTGGATGTTTCTGGTTGCTCAAAACTTAGTACCTTGCCAGAGTGTTTTAAGGAAATCAAGAGTTTGGAGGTACTTAATGTAAGTGAAACTGCTATTGAAGAGCTACCTTCATCTGTCTTTTATCTGGAAAACCTCAAAGATATCTCAGTTGCTGGGTGTAAAGGGTCAGTATCTAACTCAGTAAATGGTTTTTTTCTCCCCTTTAAGTGGGTTTTTGGGAATCAACAAACTCCTACTCCTACTCCTACTGCATTTAGATTACCAGCTTCCATACTGAATCTACCCTCTTTGAAGAGACTAAATTTAAGTTACTGCAATCTATCTGAAGAGTCAATCCCAGATGGATTTTGTCACTTATCTTCATTGCTGATTCTAGATCTCACCGGGAACAACTTTGTTAGTCTACCAAGTTGCATTTCCAGACTCTCAAATCTTGAATGTCTTATTGTAAACTGCTGCAAAAATCTTCAAAGGTTGCCAGAACTTCCATCAAGCATGGAACAATTGGATGCAAGCAATTGCACTTCACTGGAAACTTCCAAATTCAATCCATCTAAGCCATGCAGTCTCTTCGCATCACCTACAAAATTGCATGTACCAAGAGAACTGAAAGGCATTTTAGAGGAACTCGGTCTTCCCAAAGCAAGATTTGACATGCTAATCACAGGGAGTGAAATTCCAACATGGTTTGTCCCTCAAAAATGTGTTTCATTTGCAAAAATATCAGTCCCTCAGAATTGCCCTATGAGTGAATGGGTGGGATTTGCTTTCTGTTTCCTGTTAGTAAGTTATGTTTTCCCACCTGAGGTGCACCATCATGAAGTTGAATGCTTCTTGTTTAGACCTCGTGGCAAGGTGTTCATCAGCTCCAGGATTTTACCTACCATGGAGCCATGTTACCCTCACCTTTATTTTCTCTATTTGCCCTTTGATAAATTGCGTAATATAATTTATGAAGGCGATGGTTGCAGTGAAATTGAATTTGTATTGAAAAGGTATTGTTGTGATTATAAATTGGAAATAGTGAGGTGTGGGTGTCGTTTGGTATCTAAGCAAGATGTTGAAGATAGTATCATTTCTTCTAGTGATGAGCTCGGATTGGACAGTGAGATGGTGTGA 3417 0.3924 MGSANEGASSSVWSNHVFVSFRGDDTRKGFTDHLFASLERSGIKTFRDDHDLERGKLISIELMKAIEESMFALIIFSPNYASSTWCLDELQKILECKKEVFPIFYGVDPSDVRHQRGSFAKAFRKHEEKFRENRKKVERWRHALTEVASYSGWDSKDEHEAALIETIVGHIQKKLIPRLPCCTHNLVGIESRMKEVNSLMGIRLNDVRFIGIWGMGGIGKTTIARLVYEAIKEQFKVSCFVENIREVSKSNGLVHIQKELLSHLNVRSSDFYNLHDGEKIIANSFSNKRVLLVLDDVSELSQLKNLAGKQEWFGPGSRVIVTTRDKHLLKTHGVDITCKARGLAQNEALRLFCLNAFKQDQPKEEYLNLCKEVVEYARGLPIALEVLGSHLHGRTVEVWHSALEQIRSSPHSKIQDTLKISYESLDSTEKKLFLDIACFFKGMDIDEVKNILKNCGDHPEIGVDILVERCLVTLDSIKNKLGMHDLLQEMGRNIVFQESPNDPGKRSRLWSQKDIDYVLTKNRGTDKIQGMVLNLVQPCDYEARWSTGAFSKISQLRLLKLCDMQLPLGLNCLSSALKVLHWRGCPLKALPLTTNQLDEIVDLKLSHSKIEQLWHGAKLMEKLKTINLSFSKNLKRSPDLSGVPNLESLVLEGCISLTEVHPSLVHHKKLAMMNLKDCKRLKTLPSKMEMNALKDLNLSGCSEFKYLPEFGESMEHFSELSLEGTAISKLPLSLGCLVGLAHLYLKNCKNLVCLPDTIHKLKSLKVLDVSGCSKLSTLPECFKEIKSLEVLNVSETAIEELPSSVFYLENLKDISVAGCKGSVSNSVNGFFLPFKWVFGNQQTPTPTPTAFRLPASILNLPSLKRLNLSYCNLSEESIPDGFCHLSSLLILDLTGNNFVSLPSCISRLSNLECLIVNCCKNLQRLPELPSSMEQLDASNCTSLETSKFNPSKPCSLFASPTKLHVPRELKGILEELGLPKARFDMLITGSEIPTWFVPQKCVSFAKISVPQNCPMSEWVGFAFCFLLVSYVFPPEVHHHEVECFLFRPRGKVFISSRILPTMEPCYPHLYFLYLPFDKLRNIIYEGDGCSEIEFVLKRYCCDYKLEIVRCGCRLVSKQDVEDSIISSSDELGLDSEMV 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0651 1138 PANTHER TMV RESISTANCE PROTEIN N-LIKE 21 747 - -
Aed2g0651 1138 PANTHER TMV RESISTANCE PROTEIN N-LIKE 733 946 - -
Aed2g0651 1138 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 747 IPR044974 GO:0006952
Aed2g0651 1138 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 733 946 IPR044974 GO:0006952
Aed2g0651 1138 SMART till_3 14 150 IPR000157 GO:0007165
Aed2g0651 1138 Gene3D - 342 426 IPR042197 -
Aed2g0651 1138 Pfam C-JID domain 988 1121 IPR045344 -
Aed2g0651 1138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 436 IPR027417 -
Aed2g0651 1138 Pfam TIR domain 16 176 IPR000157 GO:0007165
Aed2g0651 1138 Pfam NB-ARC domain 205 427 IPR002182 GO:0043531
Aed2g0651 1138 SMART LRR_typ_2 860 884 IPR003591 -
Aed2g0651 1138 SMART LRR_typ_2 885 908 IPR003591 -
Aed2g0651 1138 SMART LRR_typ_2 761 784 IPR003591 -
Aed2g0651 1138 SMART LRR_typ_2 785 808 IPR003591 -
Aed2g0651 1138 Gene3D - 9 173 IPR035897 -
Aed2g0651 1138 ProSiteProfiles TIR domain profile. 13 175 IPR000157 GO:0007165
Aed2g0651 1138 SUPERFAMILY RNI-like 853 949 - -
Aed2g0651 1138 Gene3D Ribonuclease Inhibitor 544 690 IPR032675 -
Aed2g0651 1138 Gene3D Ribonuclease Inhibitor 839 963 IPR032675 -
Aed2g0651 1138 Gene3D Ribonuclease Inhibitor 691 830 IPR032675 -
Aed2g0651 1138 SUPERFAMILY L domain-like 483 822 - -
Aed2g0651 1138 Gene3D - 174 336 IPR027417 -
Aed2g0651 1138 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 153 IPR035897 -
Aed2g0651 1138 PRINTS Disease resistance protein signature 284 298 - -
Aed2g0651 1138 PRINTS Disease resistance protein signature 377 391 - -
Aed2g0651 1138 PRINTS Disease resistance protein signature 209 224 - -
Aed2g0651 1138 PRINTS Disease resistance protein signature 759 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0651 Aed-Chr2 4697433 4702108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0651 9 814 WRKY Transcription Factor Family AT4G12020 32.410 1.24e-108 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0651 - - gmx:100815486 1862.04