Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0646 ATGGCAGCTGTTAGGTCTTCCTCTGTAAGATGGTTAGGAAGCACAATTAAGGGTTCTTTCAGTATGGAATTAGTTCAATACTGTCACTTTCACCCTAGTGTGTGTAGTATGAACCTTGCAAGGTTGCCAAGTGATTCGTTGAATCATCCTTATTACAAAGGGGAATTACAGTTTGCTAGGAATCAGATTAGTAATTTGGCTTCTGAATCCCTTGGAAGTAGTCACCACTTTGCTACTAGAGCCAATGCATCGGTTAAACCTAGACTCTCTAGCTATTGTTTTCAAAATGCCCTTCCTTTTGCTTCCACGAGCCACATGTTGAATCGCCGAATGTTTTCATCGTCGGTGGGTGGCAAAGGGAGTAGAGATGGTGGCTCAGAAGTTTCTGCGGGTTCTGGTGTGAGTGATGTGAATACCTCTGGTGATTCTGTTGTTGCGGGTGATTGGACTGAGAGGATTAGAGATGCTTGGAAGGGCGTGGTTGATGCAGCATCATTTGCTGGGGATAAGGTTAAAGAGACTTCTGATGATCTCACTCCTTATGCTCGGCAGTTGCTTGATTCACACCCGTATCTTGACAAGGTGGTTATTCCAGTTGGTGGTACTTTAACTGCTACTGTATTAGCTTGGCTCTTGCTGCCTAGGATTTTGAGGAAATTTCACAAATATGCAGTGCAAGGTCCCGTTTCTCTATTGCCAGCAAGCGTGTCTGTGGAGCCAGTTCCTTATGAGAAAAGCTTTTGGGGTGCTATGGAGGATCCAGTGCGATACTTAGTTACCTTCATTGCATTCTCACAAATTGGTGTAATGGTGGCTCCAACAACTATAACCTCACATCTTGCACCCGTTTGGAGGGGTGCAGTGATAGTTTCATTTGTATGGTTTTTGCATAGATGGAAAACAAATGTTTTTGCACGGACATTGTCCAGTCAAAGTTTACTTGTACTTGATAGGGAGAAAGTGCTTACTCTAGACAAAATCGCATCTGTTGGTCTATTTGTGATTGGTATAATGGCTTTAGCCGAGGCTTGTGGTGTGGCTGTGCAATCTATTGTGACCGTTGGTGGTATTGGAGGAGTGGCTACTGCTTTCGCTGCCAAGGACATTCTTGGCAACGTGTTCAGTGGTTTATCTATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGCTCGATAGAGGGTCAAGTGGTGGAAATGGGTCTTACTACCACATCATTGCTGAGTTCGGAGAAGTTCCCAGTCATTGTGCCAAACTCATTTTTTTCTAGCCAGGTTATTGTGAACAAGTCCCGTGCTGAGTATCGTGCCATTATTACCAAAATTCCGCTGCAAACTGAGGATTTAAGTAAGATTCCCCAGATATCAGATGGTGTAAAAAGCATGCTCAGTTCAAATGCAAAGGTTTTCTTAGGGAAAGATGTTCCCTACTGTTTCTTATCTCATATAGAAAGTTCATATGCAGAATTGACTCTTGAATACAACCTCAAACAAATGTGCAAACATGAATTATACTCTGCAGAACAAGATATTCTCCTGCAGGCAGTGCAGATCATTAAGAGTCATGGGGTTGCTCTTGGCAGCACATGGCAAGAGACATCTACTAAATGA 1620 0.4302 MAAVRSSSVRWLGSTIKGSFSMELVQYCHFHPSVCSMNLARLPSDSLNHPYYKGELQFARNQISNLASESLGSSHHFATRANASVKPRLSSYCFQNALPFASTSHMLNRRMFSSSVGGKGSRDGGSEVSAGSGVSDVNTSGDSVVAGDWTERIRDAWKGVVDAASFAGDKVKETSDDLTPYARQLLDSHPYLDKVVIPVGGTLTATVLAWLLLPRILRKFHKYAVQGPVSLLPASVSVEPVPYEKSFWGAMEDPVRYLVTFIAFSQIGVMVAPTTITSHLAPVWRGAVIVSFVWFLHRWKTNVFARTLSSQSLLVLDREKVLTLDKIASVGLFVIGIMALAEACGVAVQSIVTVGGIGGVATAFAAKDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTTTSLLSSEKFPVIVPNSFFSSQVIVNKSRAEYRAIITKIPLQTEDLSKIPQISDGVKSMLSSNAKVFLGKDVPYCFLSHIESSYAELTLEYNLKQMCKHELYSAEQDILLQAVQIIKSHGVALGSTWQETSTK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0646 539 MobiDBLite consensus disorder prediction 114 136 - -
Aed2g0646 539 Gene3D - 384 432 IPR023408 -
Aed2g0646 539 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 93 535 - -
Aed2g0646 539 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED 93 535 - -
Aed2g0646 539 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 283 367 IPR011014 GO:0016020
Aed2g0646 539 SUPERFAMILY Sm-like ribonucleoproteins 368 433 IPR010920 -
Aed2g0646 539 Pfam Mechanosensitive ion channel 326 528 IPR006685 GO:0016020|GO:0055085
Aed2g0646 539 Gene3D - 282 383 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0646 95 537 Mechanosensitive Ion Channel Family AT4G00290 60.586 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0646 K22047 - gmx:100789047 903.664