Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0640 ATGCATTTCGCAAATAATATTAAGTCACTGAAGCAAGATTCTGGGATCGACAGTGAGCCATGCCATATCTCTTGTAGTGGGCTATCTCCGAGTCTAAGATCTGATACATTACTTGCTGACTTCGAGATCTGCACATGTTGTGGTGGTGTCAAACCTTTAGCTGTTGAAGACGTGAACAAATATAGCAAGCCATCACAATGGGCTACTTCCAAACATGTCAGACTGGATAAAGACACTGTGCATGGTACCAAGATTTTTAAACAAGAACAACTGATAACTTGCACGGTTTCTAGATTTTTTCTGAGAAATTGCTCAATCCAAGAGTTCTCTAACCCAATGGTTTCAAGTTCTGGAAGGGACACTAAGCCTAATACTTTCAGCTGTGATAGGAAAACCATTAGCTTCTCTACATTGGCCACCTGCTTTAGAAATCCATTTAGAAGCTGCGTGCTTAGAATTTCACGAGGATCTTCATTCCAAATATTCTCCAGATTTGGTAGCCGCTCTAAAGTCAATGTTTTGAGGAGAAAATGGAGGGCTGGTCCCATAGTTGCACATTTCATATCAAATATGTTTGTAACTTTCAACGTTTTCAATTTAGTGAAGAAAGGAATTAAATGGAAGGGTAGCACTGCATCTGATAAATATTGGCACCCGTCTACGGTCAAGGAGTCCAAGTTACTGAAGCACCATGGTTTTAGGAAGAAATTCTCTTCACCTCTATTGCAGGGTTTGGAGAGTGAGAGTCACTGTGAGAGAATGGGGGGGGGTGCAAGTCGCAGAGTGGTGGCACGAGTCACGGAGGGGGATGCAAATTGTGCACAGGAGGTGGTGGAGGAAGAGAAGTGGTGGCACGCCAGTTGTGGAGGAGAGGATGACAGCATGAGGAGGGAGGAGGGGAGGCTAAGAGGTGATGGATACATGGACATAAAGTTTTCATCGAGTCGCAATCGTATACTGACAGTTGGTCCAACGATGGGAAACTTAAACTCCCTTTGTAACTTTCCGGCGGAAATATTATCTCATCCTCATGTGATTCATCAACCTTTGAGCTACGGATACTACAGATGTAGCAGTTCAAAGGGGTGTTTAGCAAGGAAACAAGTAGAGAGAAACAGATCCGAACCAACAATAGGTGGAAGAAGAGGTGGCTTAGCAGAAACGGTTGTAACTGATGATTTCTTTGAAGGCTTAGAGGAACTGACAGGGTCTGCCACTGAACACTTTACAATTAGTAGTAGCAACATTGATCGGTGGCCACTGGCAAATTACAACGAGTCATGCTTTTCGTTGCAGAGAGAATAA 1305 0.4345 MHFANNIKSLKQDSGIDSEPCHISCSGLSPSLRSDTLLADFEICTCCGGVKPLAVEDVNKYSKPSQWATSKHVRLDKDTVHGTKIFKQEQLITCTVSRFFLRNCSIQEFSNPMVSSSGRDTKPNTFSCDRKTISFSTLATCFRNPFRSCVLRISRGSSFQIFSRFGSRSKVNVLRRKWRAGPIVAHFISNMFVTFNVFNLVKKGIKWKGSTASDKYWHPSTVKESKLLKHHGFRKKFSSPLLQGLESESHCERMGGGASRRVVARVTEGDANCAQEVVEEEKWWHASCGGEDDSMRREEGRLRGDGYMDIKFSSSRNRILTVGPTMGNLNSLCNFPAEILSHPHVIHQPLSYGYYRCSSSKGCLARKQVERNRSEPTIGGRRGGLAETVVTDDFFEGLEELTGSATEHFTISSSNIDRWPLANYNESCFSLQRE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0640 434 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 348 377 IPR044810 GO:0003700
Aed2g0640 434 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 384 415 IPR044810 GO:0003700
Aed2g0640 434 SUPERFAMILY WRKY DNA-binding domain 345 377 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g0640 434 Pfam WRKY DNA -binding domain 351 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0640 434 Gene3D WRKY domain 340 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g0640 434 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 348 377 - -
Aed2g0640 434 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 384 415 - -
Aed2g0640 434 ProSiteProfiles WRKY domain profile. 349 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0640 Aed-Chr2 4649493 4652884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0640 349 378 WRKY Transcription Factor Family AT4G01250 76.667 6.78e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g0640 WRKY 1.2e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0640 K13425 - gmx:100815829 72.0182