Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0632 ATGGTGTCGGTTAATCCAAACCCCGCTCAAGGCTTCTACTTCTTCGATCCCTCCAATATGACCCTTCCCGGCGTCAATAATCTTCCTACGCCGCCTCCGGCAGCTCCCTCCGTTGCACCTGCCGCCGTGGAGGATCCGAGTAAGAAGATCCGGAAACCTTACACGATTACCAAGTCCAGGGAGAGCTGGACCGAGCAGGAGCACGACAAGTTTCTAGAAGCTCTCCAATTATTTGATCGGGACTGGAAAAAGATTGAAGCATTTGTTGGTTCAAAAACAGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTTAAAGTTCAGAAGAATGGAACAAGTGAACATGTTCCTCCTCCTCGGCCAAAGAGAAAAGCTGCTCGTCCATACCCTCAAAAGGCTCCTAAAACTCCTACTGTATCCCAAGCTCTGGGCCCACTGCAATCTTCACCTGCTTTCATTGAACCTGCATTCATCTATAGCCCGGATTCTTCATCTGTGCTTGGAACTCCAGTTACTAACATGCCTCTGTCATCCTGGAATTATAATACTACACCACAACCAGTCAATATGCCACAAGTGACCAGAGATGACATGGGATTGACTGGAGCTGGACAAGCTGTTCCTGTTAATTGTTGCTACAGCAGTAGTAATGAGAGCACCCCTCCAACTTGGCCAAGTAGCAAAAGGATTAATCAAGGTGACCAGGGAAAGCCAATTACAGTAATGCCAGATTTTGCACAAGTCTACAGCTTCATTGGCAGTGTATTCGATCCAAATTCAACTAATCACCTACAGAAACTAAGACAAATGGACCCAATAAATGTGGAAACGGTATTGTTGTTGATGAGGAATCTCTCCATCAATTTAACGAGTCCTGAATTTGAGGACCATAAGAGGCTACTTTCATCATATGATAGCAGCTCTGACAAGTCAAAGTTTGTTAACATATGCAGCAAATCCCTTACTAATAAATCTGAGAGTGCTGTTCTGTCTGCTTAG 1002 0.4481 MVSVNPNPAQGFYFFDPSNMTLPGVNNLPTPPPAAPSVAPAAVEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAARPYPQKAPKTPTVSQALGPLQSSPAFIEPAFIYSPDSSSVLGTPVTNMPLSSWNYNTTPQPVNMPQVTRDDMGLTGAGQAVPVNCCYSSSNESTPPTWPSSKRINQGDQGKPITVMPDFAQVYSFIGSVFDPNSTNHLQKLRQMDPINVETVLLLMRNLSINLTSPEFEDHKRLLSSYDSSSDKSKFVNICSKSLTNKSESAVLSA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0632 333 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Aed2g0632 333 MobiDBLite consensus disorder prediction 109 145 - -
Aed2g0632 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Aed2g0632 333 PANTHER MYB TRANSCRIPTION FACTOR 2 328 - -
Aed2g0632 333 CDD SANT 62 105 IPR001005 -
Aed2g0632 333 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Aed2g0632 333 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Aed2g0632 333 PANTHER SWI/SNF COMPLEX-RELATED 2 328 - -
Aed2g0632 333 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Aed2g0632 333 SMART sant 59 107 IPR001005 -
Aed2g0632 333 Gene3D - 63 110 - -
Aed2g0632 333 ProSiteProfiles SANT domain profile. 58 111 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0632 Aed-Chr2 4578944 4585311 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g0632 Myb_DNA-binding 2.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0632 - - gmx:778090 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0632 2 4578944 4585311 Aed2g0632 2 4578944 4585311 ECH
Aed2g0632 2 4578944 4585311 Aed3g0588 3 4164697 4169378 ECH
Aed3g0588 3 4164697 4169378 Aed2g0632 2 4578944 4585311 PCT