Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0628 ATGGTGGACGCCGGCGACTTTGCCGGCATCATTTGTTCGATCTGCTATGAGCCCCTCAACCCCATTACCGAGGACCTTCAATCGGTCTCCATCTGCGGCCACGTTTTTCACGAGCTTTGTCTGCAGCAATGGTTCGAGTACTCTTCGAAAGGGAAGAAGCACACTTGCCCCATTTGCAAGCAGGGTTGCAAGGCCAGCGACGCGTGCAGGCTCTATTTTCAGTCAGTGGGAGATGCGACCGATACTGTGAAGCCTCAGAAGTGCTTTGAATCTGAGGAAGATTCTGGGGTTCTGCGTAGGGAAGTGAAGAGATTGGAGCTTTGTAATTGCAAGGAGCAAGCAAAGATAGAAACAGCATCAAAGAATAAGGCTTTACATCAAAAGGCATCCATACAATTCCAGCTTAGTATGAAATCACAGGAGCTTGAGAAGTCAAGTTTGGAGCGTTTTAGATTAAAAGAAAGGAATATGGCTTTGGCTAAAGAACTTGCAGCATTGAAATTAGTATCTGATCTGGATATTGATGAAGAGGAGGTTTTGAAGCTTGCCACTTTAGGTAATGGGGCCAACAGTAAAGACACAATAGATACATTGAAAAGATCTCTGGTCATGCGGAACAGGAGTTACAAAGAATTGATGGCCAAGTGCAATATTCTTGGAAGAGGTGAGGCTCGTTATAGCAAAAAGCTTGAGAAGGCTAATGAGAAGATCACTAAACTGAAGGAGAGGCTACAAGAACTGGAAACATTAGCTGAAGCAAAAGAGAACGAATATCTGATGTCTCTCAAACATTCAAAAAAACTAAAGAGTTCAAAGAATCTCGAAGAAAACATGAAATCAGATTCTGATGCATTGACAGCTTGCAAATTTTCATTAAAAGAACAAAGCAAACAAACTTCAACACCCAAATCTGCAATAGACCTGACTGCAAACGACAACAGTAAATCTTTTCAATCTTTGAATATAGAGAACTCCAATGTTGCTAAAAGTAAGACTGTGAATGTTAGTAATGGAAGTAAAGCTATCTTTTCTCTTGATATAAAAAGAGAGTATATCTCAATTGATGAAGATGATTCAGAAGGCACTAATGCTTTGCAAGGATGTTCAAAAAAGAACAAAGATCAAGACAGGGATGATATTGCTTTTAGCAAGCCTTCTCTAGCGAAGCCAGAGGCCGTGTCTGGCATAACCATCGAAACATCATTACAAGGAAAATGTACAATGGCCGAGTCTCCCAGAGTTGATATTGACATTGACATGGCTAACATTTCAGCTGGTGCTATGGATGAAGATGTAACTTTACAAGCCAACGCTAAACGACCCACCGTGAACATTAGAAAGGAGTCACCATTAACACTTTCAAATTCAGGGAATGTGTGCTTTTCTGGTGGATTGCTTGGTCCTGATGGAACTAATCGATACTTGGGTAAATGGTGCAAGCGTGGACAGAACAGTGAATCATCACCTGCAAAGCGATCAAGTAATGGGGATTTAATAGCTGTCGGGGCTGATGGTAGAGGAGGCAAAATAAAAGTTCTAAGGACTCCTAGTCAAATCCTCACGGTGAGTTATGTAGTGTTTAATATTTTGATGGAATGGAATGGTGGTAAGGAAAATTCACTAAGTTCAAAAAGGTCTAAGTTAGGAGTTAAAACAAGTGGTTTGCAATCGAAGGGGTGCTTGCAGATAGAACACTTTTTTGGGAGAGTCACTCAGTAA 1719 0.4124 MVDAGDFAGIICSICYEPLNPITEDLQSVSICGHVFHELCLQQWFEYSSKGKKHTCPICKQGCKASDACRLYFQSVGDATDTVKPQKCFESEEDSGVLRREVKRLELCNCKEQAKIETASKNKALHQKASIQFQLSMKSQELEKSSLERFRLKERNMALAKELAALKLVSDLDIDEEEVLKLATLGNGANSKDTIDTLKRSLVMRNRSYKELMAKCNILGRGEARYSKKLEKANEKITKLKERLQELETLAEAKENEYLMSLKHSKKLKSSKNLEENMKSDSDALTACKFSLKEQSKQTSTPKSAIDLTANDNSKSFQSLNIENSNVAKSKTVNVSNGSKAIFSLDIKREYISIDEDDSEGTNALQGCSKKNKDQDRDDIAFSKPSLAKPEAVSGITIETSLQGKCTMAESPRVDIDIDMANISAGAMDEDVTLQANAKRPTVNIRKESPLTLSNSGNVCFSGGLLGPDGTNRYLGKWCKRGQNSESSPAKRSSNGDLIAVGADGRGGKIKVLRTPSQILTVSYVVFNILMEWNGGKENSLSSKRSKLGVKTSGLQSKGCLQIEHFFGRVTQ 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0628 572 CDD RING-H2 12 60 - -
Aed2g0628 572 Pfam Ring finger domain 12 60 IPR001841 -
Aed2g0628 572 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 571 - -
Aed2g0628 572 SMART ringv_2 11 60 IPR011016 GO:0008270
Aed2g0628 572 SMART ring_2 12 59 IPR001841 -
Aed2g0628 572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 62 IPR013083 -
Aed2g0628 572 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 571 - -
Aed2g0628 572 MobiDBLite consensus disorder prediction 359 378 - -
Aed2g0628 572 Coils Coil 223 257 - -
Aed2g0628 572 ProSiteProfiles Zinc finger RING-type profile. 12 60 IPR001841 -
Aed2g0628 572 SUPERFAMILY RING/U-box 10 64 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0628 351 572 C3H Transcription Factor Family AT4G01270 33.333 1.05e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0628 K11985 - gmx:100812811 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0628 2 4542168 4546518 Aed2g0628 2 4542168 4546518 ECH