Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0627 ATGGAGCCCGATTGGGATCTCCACGCCGTCGTCAGAGGCTGTACCACCACTTCCTCTGCCGCCACCGCCTCGTTCTCTGTTACTTCCTCTGCCTTTGGGGCTTCTAACTCGCCTTCAACTTCCTGCAGTTTTTTATCCTCTGTTTACAACCCTGCTGAACAAAAAGGGCAAGTTTTGTCTCTTTCATTCGAGAACCCCTTTGAAGCAAGGAGTTCCGATTCCATTGAAGAGCTTCACGAGCTTTGCAAGCCTTTTTTTATCAAACCAAAGCCTCAGTCTTTTCAAACCTCTTCTCCTCTCTCTTCTTCATTTTCTTATTCTTCCACACCCAAATCACCTCACAAACAACAACAACAAAAAAAGCTGTCTCAGTCTCACCATGCCGGTTCTGCCACCACCCCACGATCCAGAAGAAGAGGATACTACAGATGTAGCAGCTCAAAGGGGTGTTTAGCAAGGAAACAAGTGGAGAGAAACAGATCCGAACCAACAATGTTCATAGTCACATACACTGGTGAACACAACCACCCTGCTCCTACTCACAAAAACTCTCTTGCTGGCTCCACGCGCCACAAACCTCAAACCGAAACAAAACCGGCTTCTCCTTCCACTTCAGAGGTGGAAGAAGAGGTGGCACAACAACACAGTGCAAAGTCAGAGAGCACAGAAGAAGAAGACATGGAAGATCTCATGAAAGATGATGAGGAGTTACCAAACGAATTTGACTTAGCAGAAACGGTTGTAACTGATGAATTCTTTGAAGGCTTAGAGGAACTGACCGGGTCTGCCACTGAACACTTTACAATTAGTAGTAGCAACATTGATCGGTGGCCACTGCCCAATAATGCTGCCACTGTCGCTGGTGGTAGCTGA 873 0.4696 MEPDWDLHAVVRGCTTTSSAATASFSVTSSAFGASNSPSTSCSFLSSVYNPAEQKGQVLSLSFENPFEARSSDSIEELHELCKPFFIKPKPQSFQTSSPLSSSFSYSSTPKSPHKQQQQKKLSQSHHAGSATTPRSRRRGYYRCSSSKGCLARKQVERNRSEPTMFIVTYTGEHNHPAPTHKNSLAGSTRHKPQTETKPASPSTSEVEEEVAQQHSAKSESTEEEDMEDLMKDDEELPNEFDLAETVVTDEFFEGLEELTGSATEHFTISSSNIDRWPLPNNAATVAGGS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0627 290 MobiDBLite consensus disorder prediction 93 144 - -
Aed2g0627 290 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 139 278 - -
Aed2g0627 290 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 139 - -
Aed2g0627 290 Pfam WRKY DNA -binding domain 136 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0627 290 SMART WRKY_cls 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0627 290 ProSiteProfiles WRKY domain profile. 139 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0627 290 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 139 IPR044810 GO:0003700
Aed2g0627 290 MobiDBLite consensus disorder prediction 176 210 - -
Aed2g0627 290 Gene3D WRKY domain 102 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g0627 290 MobiDBLite consensus disorder prediction 172 236 - -
Aed2g0627 290 MobiDBLite consensus disorder prediction 93 131 - -
Aed2g0627 290 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 139 278 IPR044810 GO:0003700
Aed2g0627 290 SUPERFAMILY WRKY DNA-binding domain 136 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0627 Aed-Chr2 4535860 4538034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0627 1 289 WRKY Transcription Factor Family AT4G01250 37.537 2.97e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g0627 WRKY 3.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0627 K13425 - gmx:100815829 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0627 2 4535860 4538034 Aed1g2311 1 19165258 19167148 ECH
Aed2g0627 2 4535860 4538034 Aed7g0654 7 4838345 4839723 ECH
Aed2g0627 2 4535860 4538034 Aed2g0627 2 4535860 4538034 ECH
Aed2g0627 2 4535860 4538034 Aed3g0581 3 4105222 4107254 ECH
Aed3g0581 3 4105222 4107254 Aed2g0627 2 4535860 4538034 PCT