Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0616 ATGGAAAGCCAAGACCCACCAAACCCTCCACCACAAAACTCTAATTTGGAACCTCAAGGCTTACATGATGACATTAAAATAGACTGGGTTAGCCTTTTCTCTGGCCAAAACAACTTTCTTGGGGATCCCCCGGTGATGATGGAATGTGCTTCTTCTTCGTCCTCGTCGTGTGCTTTGATGGCTGAAAATGGAGCTCAGATGGATGAAAAGAGTGATAAAGAGAAAATGAAAGGGGGGAGATTGAAGAAGACAACACGACCCAGGTTTGCGTTTCAGACGAGAAGTGCAGATGATATTCTGGATGATGGTTATCGTTGGAGGAAATATGGGCAGAAAACTGTGAAGAACAACATACATCCCAGGTGTGTGATAATTAAGGTGTAA 384 0.4375 MESQDPPNPPPQNSNLEPQGLHDDIKIDWVSLFSGQNNFLGDPPVMMECASSSSSSCALMAENGAQMDEKSDKEKMKGGRLKKTTRPRFAFQTRSADDILDDGYRWRKYGQKTVKNNIHPRCVIIKV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0616 127 MobiDBLite consensus disorder prediction 63 88 - -
Aed2g0616 127 Pfam WRKY DNA -binding domain 101 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0616 127 SMART WRKY_cls 100 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0616 127 MobiDBLite consensus disorder prediction 1 21 - -
Aed2g0616 127 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 121 IPR044810 GO:0003700
Aed2g0616 127 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 19 121 - -
Aed2g0616 127 ProSiteProfiles WRKY domain profile. 95 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0616 127 SUPERFAMILY WRKY DNA-binding domain 93 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g0616 127 Gene3D WRKY domain 87 125 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0616 Aed-Chr2 4434036 4434419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0616 78 123 WRKY Transcription Factor Family AT2G46130 65.217 1.15e-17 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g0616 WRKY 2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0616 - - gmx:100810669 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0616 2 4434036 4434419 Aed2g0616 2 4434036 4434419 ECH
Aed3g0577 3 4087944 4088345 Aed2g0616 2 4434036 4434419 PCT