Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0580 ATGAACACTCAACAACAACAACACAACAAAAGAGAATTCAAGGGGAGAGAAGAAGGAGAAGAAGAACAGGTCCATGATGAGGAAGAAGAAAATCATTTGCTGAACAATTCAGAATGCGAAACAATACCATTGTCTTCACCCCACACAACATCACCCTCACAGTGGGAACATGCAATCAAAGAAGAAGAGAAGGACACGGTGTATGCAGCCAAGGACAAGGTGCAGATATTCGACTTGGAGTCCTCCGGTGTTGGCAGCAGGGTGGTGGGGTCCACGGAGGTGCCGCCGTTCTCGTGGAGGAAGCTGTGGCTGTTCACGGGGCCGGGGCTGTTGATGAGCGTGGCGTTCCTGGACCCGGGGAACCTTGAAGGGGACCTTCAAGCTGGAGCCGTTGCAGGGTACTCGTTGCTTTGGCTGTTGATGTGGTCAACCATCATGGGGCTGTTGATACAGCTTCTGTCGGCGAGACTCGGGGTGGCGACCGGGCGGCACCTGGCGGAGCTGTGCCGTGAGGAGTACTCCAATTGGGCCAGGTTGGTGCTGTGGTTCCTGGCTGAGATGGCTCTCATTGCTGCTGATATTCAGGAGGTTATTGGCAGTGCTATTGCTTTGAAGATTCTTAGCCATGGCCTTCTCCCCATTTGGGCTGGTGTGAACTACGGAGTGAGGAAGTTGGAAGGTGTATTCGCAGTTTTCATTGGAACTATGGGCCTTTCTTTTGCGTGGATGTTCTTTGACACAAAGCCAAGTGAAGAAGAACTACTGATGGGCCTTTTGATCCCAAGAGTTAACTCAAAAACGCTTCGCCAGGCTGTGGAAATTGTGGGGTGTGTGATAACACCACACAATGTGTTCCTCCATTCTGCATTGGTGCAATCAAGGGACATTGATATCCGTAACAAAGGCCAGGTTCAAGAGGCTATCAACTACTACTCAATTGAGTCCTCTGTTGCACTTCTAGTCACATTGGTGATCAATCTATTTGTGATAACCGTTTTTGCGAGGGTGTTCTACGGTACAGAACAGGCGAACGGCATAGGATTGGTGAATGCAGGGCAGTACCTTGAGGAGAGGTATGGAGGAGGGTTGTTTCCAATTCTCTACATATGGGGCATTGGTTTGTTAGCAGCTGGACAAAGTAGTACCATCACAGGCACATATGCAGGGCAGTTTATAACTGAGGGATTTCTTAAGCTCAATATAAAGAAGTGGTTGAGGGCATTGATCACTAGAAGTTGTGCAATTGTTCCAACTATGTTTGTTGCAATTGCTTTTAATACATCAGAAGGTTCTTTGGATACCTTGAATGAATGGCTTAATGTGGTTCAAGCAATACAGATTCCTTTTGCACTTATCCCCCTTCTTACTTTGGTGTCCAAAGAGGAGGTCATGGGGACCTTCAGAATAGGGCCTATAGTTGAGAAAGTGGCTTGGAGTGTGGCTGTGCTGGTAATATTGGTTTATGGATACATGTTATTAGATTTCTTCCTGGATGAAGTGGATGGACTGTTGTTTGGTTTTCTAGTCTTCCTTGGTGCTGCATTATGGATTTCATTTATTATATATCTGGTTCACCATAGTGGTGCCATTTCTTCAATCCTAGTGAGGTCTCCTAATTCCAAAGGCTTCTTCTCTCGCTGGTAA 1644 0.4708 MNTQQQQHNKREFKGREEGEEEQVHDEEEENHLLNNSECETIPLSSPHTTSPSQWEHAIKEEEKDTVYAAKDKVQIFDLESSGVGSRVVGSTEVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAVAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWFLAEMALIAADIQEVIGSAIALKILSHGLLPIWAGVNYGVRKLEGVFAVFIGTMGLSFAWMFFDTKPSEEELLMGLLIPRVNSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEAINYYSIESSVALLVTLVINLFVITVFARVFYGTEQANGIGLVNAGQYLEERYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMFVAIAFNTSEGSLDTLNEWLNVVQAIQIPFALIPLLTLVSKEEVMGTFRIGPIVEKVAWSVAVLVILVYGYMLLDFFLDEVDGLLFGFLVFLGAALWISFIIYLVHHSGAISSILVRSPNSKGFFSRW 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0580 547 MobiDBLite consensus disorder prediction 1 56 - -
Aed2g0580 547 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 50 545 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0580 547 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 100 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0580 547 MobiDBLite consensus disorder prediction 36 54 - -
Aed2g0580 547 PRINTS Natural resistance-associated macrophage protein signature 406 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0580 547 PRINTS Natural resistance-associated macrophage protein signature 440 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0580 547 PRINTS Natural resistance-associated macrophage protein signature 181 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0580 547 PRINTS Natural resistance-associated macrophage protein signature 378 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0580 547 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 50 545 - -
Aed2g0580 547 Coils Coil 10 30 - -
Aed2g0580 547 Pfam Natural resistance-associated macrophage protein 123 470 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0580 547 Hamap Divalent metal cation transporter MntH [mntH]. 85 496 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0580 Aed-Chr2 4229890 4233302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0580 61 527 Inorganic Solute Cotransporters AT1G47240 70.062 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0580 K21398 - gmx:100801411 929.087