Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0566 ATGGAAGAGAATATGAAGTGTGAACAAGTTGGTCTCATTGATGAGTTAATGCAAGGGAAGGAGCTAGCAAAGAAGCTCTGTGACCATCTAGTCTCATCATCATCATCATCTTCAGCATCATCTCATGAAACAAATGAAGTCCTAATTGAGAAAATACTTTCCACCTATGAGAAAGTACTTGCCATGCTGAATTGCAAGGCTAATGTAGGAGAAAGCAAGGCCAACAACAATGGCAGCATGATGATGGATTCCCATTGTTCTTTCACAAATGGTAGCCCCAAAAGTGAGGTCTTGGAGCCTGATGAGGTTAAGAACAAACATGCCTCTAAGAAAAGAAAGACCAAGCCAAACTGGACAGAACAAGTGAAGGTGCATTTGGGAACACCTGAGGGATCTCTGGATGATGGCTATAGCTGGAGAAAATATGGACAGAAGGATATTCTTGGAGCAAAGTTTCCAAGAGGATATTACAGATGCACATATAGGAATGTACAAGGATGTCTGGCCACAAAGCAGGTGCAAAAGTCAGATGAAGACCCGATGATATGTGAGATAACCTACAAAGGAAGACACACATGCACCCAATCAAGTCACTTAAGCAAGGCAGCGGCATCAAAATTGGGAGAAAATAAGCACCAAACCCATCAAATTAAGACTCAACCACGACAAGAGAAAACAGAACAACCACCAGACACAATTTTCACTTTTGGATCATCAGGTCTTGAAGTTAAAGTAGAAGACATGGACCACAAGGAGGACATATTCCCATCATTTTACTTTTCTTCTCCCTCAGAAAACGAGGACAGCAACAGCATATTCTCATACACCACCATGATTGCGAACAACAACTTAATGGAAAGCTTCTCTCCTGCATTCATATCTCCAACAACTTCAGATATTGAATCAAACTTTTTCTGCCACTGGGGGGGCAGCACTACTGGATTAGGCCAAAATGTGCAAAGCTCAGAGTCTGATATCACTGATATTGTTGTTTCAGCTCCAACTTCAGTCACCAATTCACCGATAATGGACCTTGATTTCCTTCTTGATAAGTTCGATTTCGACACGGATTTCCCTTTGAGCACCACAGAACTTTGCACTTGA 1104 0.4176 MEENMKCEQVGLIDELMQGKELAKKLCDHLVSSSSSSSASSHETNEVLIEKILSTYEKVLAMLNCKANVGESKANNNGSMMMDSHCSFTNGSPKSEVLEPDEVKNKHASKKRKTKPNWTEQVKVHLGTPEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTYRNVQGCLATKQVQKSDEDPMICEITYKGRHTCTQSSHLSKAAASKLGENKHQTHQIKTQPRQEKTEQPPDTIFTFGSSGLEVKVEDMDHKEDIFPSFYFSSPSENEDSNSIFSYTTMIANNNLMESFSPAFISPTTSDIESNFFCHWGGSTTGLGQNVQSSESDITDIVVSAPTSVTNSPIMDLDFLLDKFDFDTDFPLSTTELCT 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0566 367 MobiDBLite consensus disorder prediction 91 116 - -
Aed2g0566 367 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0566 367 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0566 367 Gene3D WRKY domain 118 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g0566 367 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 364 - -
Aed2g0566 367 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 364 IPR044810 GO:0003700
Aed2g0566 367 SUPERFAMILY WRKY DNA-binding domain 131 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g0566 367 MobiDBLite consensus disorder prediction 211 225 - -
Aed2g0566 367 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g0566 367 MobiDBLite consensus disorder prediction 198 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0566 Aed-Chr2 4104319 4107114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0566 5 293 WRKY Transcription Factor Family AT4G23810 35.455 3.54e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g0566 WRKY 7.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0566 - - gmx:100170747 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0566 2 4104319 4107114 Aed11g1775 11 21155026 21156374 ECH
Aed2g0566 2 4104319 4107114 Aed2g0566 2 4104319 4107114 ECH
Aed11g1775 11 21155026 21156374 Aed2g0566 2 4104319 4107114 ECH
Aed2g2652 2 28729743 28732865 Aed2g0566 2 4104319 4107114 PCT