Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed2g0566 | ATGGAAGAGAATATGAAGTGTGAACAAGTTGGTCTCATTGATGAGTTAATGCAAGGGAAGGAGCTAGCAAAGAAGCTCTGTGACCATCTAGTCTCATCATCATCATCATCTTCAGCATCATCTCATGAAACAAATGAAGTCCTAATTGAGAAAATACTTTCCACCTATGAGAAAGTACTTGCCATGCTGAATTGCAAGGCTAATGTAGGAGAAAGCAAGGCCAACAACAATGGCAGCATGATGATGGATTCCCATTGTTCTTTCACAAATGGTAGCCCCAAAAGTGAGGTCTTGGAGCCTGATGAGGTTAAGAACAAACATGCCTCTAAGAAAAGAAAGACCAAGCCAAACTGGACAGAACAAGTGAAGGTGCATTTGGGAACACCTGAGGGATCTCTGGATGATGGCTATAGCTGGAGAAAATATGGACAGAAGGATATTCTTGGAGCAAAGTTTCCAAGAGGATATTACAGATGCACATATAGGAATGTACAAGGATGTCTGGCCACAAAGCAGGTGCAAAAGTCAGATGAAGACCCGATGATATGTGAGATAACCTACAAAGGAAGACACACATGCACCCAATCAAGTCACTTAAGCAAGGCAGCGGCATCAAAATTGGGAGAAAATAAGCACCAAACCCATCAAATTAAGACTCAACCACGACAAGAGAAAACAGAACAACCACCAGACACAATTTTCACTTTTGGATCATCAGGTCTTGAAGTTAAAGTAGAAGACATGGACCACAAGGAGGACATATTCCCATCATTTTACTTTTCTTCTCCCTCAGAAAACGAGGACAGCAACAGCATATTCTCATACACCACCATGATTGCGAACAACAACTTAATGGAAAGCTTCTCTCCTGCATTCATATCTCCAACAACTTCAGATATTGAATCAAACTTTTTCTGCCACTGGGGGGGCAGCACTACTGGATTAGGCCAAAATGTGCAAAGCTCAGAGTCTGATATCACTGATATTGTTGTTTCAGCTCCAACTTCAGTCACCAATTCACCGATAATGGACCTTGATTTCCTTCTTGATAAGTTCGATTTCGACACGGATTTCCCTTTGAGCACCACAGAACTTTGCACTTGA | 1104 | 0.4176 | MEENMKCEQVGLIDELMQGKELAKKLCDHLVSSSSSSSASSHETNEVLIEKILSTYEKVLAMLNCKANVGESKANNNGSMMMDSHCSFTNGSPKSEVLEPDEVKNKHASKKRKTKPNWTEQVKVHLGTPEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTYRNVQGCLATKQVQKSDEDPMICEITYKGRHTCTQSSHLSKAAASKLGENKHQTHQIKTQPRQEKTEQPPDTIFTFGSSGLEVKVEDMDHKEDIFPSFYFSSPSENEDSNSIFSYTTMIANNNLMESFSPAFISPTTSDIESNFFCHWGGSTTGLGQNVQSSESDITDIVVSAPTSVTNSPIMDLDFLLDKFDFDTDFPLSTTELCT | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed2g0566 | 367 | MobiDBLite | consensus disorder prediction | 91 | 116 | - | - | |
Aed2g0566 | 367 | SMART | WRKY_cls | 133 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed2g0566 | 367 | ProSiteProfiles | WRKY domain profile. | 128 | 191 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed2g0566 | 367 | Gene3D | WRKY domain | 118 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed2g0566 | 367 | PANTHER | WRKY TRANSCRIPTION FACTOR 46-RELATED | 1 | 364 | - | - | |
Aed2g0566 | 367 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 364 | IPR044810 | GO:0003700 | |
Aed2g0566 | 367 | SUPERFAMILY | WRKY DNA-binding domain | 131 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed2g0566 | 367 | MobiDBLite | consensus disorder prediction | 211 | 225 | - | - | |
Aed2g0566 | 367 | Pfam | WRKY DNA -binding domain | 134 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed2g0566 | 367 | MobiDBLite | consensus disorder prediction | 198 | 231 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed2g0566 | Aed-Chr2 | 4104319 | 4107114 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed2g0566 | 5 | 293 | WRKY Transcription Factor Family | AT4G23810 | 35.455 | 3.54e-45 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed2g0566 | WRKY | 7.4e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed2g0566 | - | - | gmx:100170747 | 561.222 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed2g0566 | 2 | 4104319 | 4107114 | Aed11g1775 | 11 | 21155026 | 21156374 | ECH | |
Aed2g0566 | 2 | 4104319 | 4107114 | Aed2g0566 | 2 | 4104319 | 4107114 | ECH | |
Aed11g1775 | 11 | 21155026 | 21156374 | Aed2g0566 | 2 | 4104319 | 4107114 | ECH | |
Aed2g2652 | 2 | 28729743 | 28732865 | Aed2g0566 | 2 | 4104319 | 4107114 | PCT |