Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0537 ATGGAGCAAGAGCCTCAACACAGTAGCGTCCCCGACGACGCCGCCACGAGCTCAGGCGACAAGCCCACCACCCCTCGCAACGGCGGCACCCGCCACCCGCTCTTCCGCGGCGTCCGCAAACGCCGCTGGGGCAAATGGGTCTCCGAAATCCGGGAGCCAAGGAAAAAGTCACGCATATGGCTCGGCTCCTTCCCGGCGCCGGAGATGGCGGCCAAGGCCTACGACGTCGCCGCCTACTGCCTCAAAGGCCGCAAGGCGCAGCTCAACTTCCCCGACGAGGTCCACCGCCTTCCGCCGCTCCCCTCCGCCTGCACCGCCCGCGACATCCAGGCCGCCGCCGCCAAGGCCGCCCACATGATGATGGTCCAGGCCGCAGCCGACTCGCCGGAGAAGAGCAGCAGCATTACTTCCGACGGAGACGGCGATGGCAACGACGACTTCTGGGGCGAAATTGAGCTGCCGGAGCTCCTCCACGGGAAGTGGTGGACCTCCGACCGTGAAGTCATGCCGTGGCCGGAGGCTGCCGAGCTTCCGCCCCAGCAGCCGTTCACCACGGCATGCTTGTAG 567 0.6755 MEQEPQHSSVPDDAATSSGDKPTTPRNGGTRHPLFRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPDEVHRLPPLPSACTARDIQAAAAKAAHMMMVQAAADSPEKSSSITSDGDGDGNDDFWGEIELPELLHGKWWTSDREVMPWPEAAELPPQQPFTTACL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0537 188 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 188 - -
Aed2g0537 188 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Aed2g0537 188 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Aed2g0537 188 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
Aed2g0537 188 MobiDBLite consensus disorder prediction 125 148 - -
Aed2g0537 188 MobiDBLite consensus disorder prediction 8 25 - -
Aed2g0537 188 MobiDBLite consensus disorder prediction 1 37 - -
Aed2g0537 188 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Aed2g0537 188 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Aed2g0537 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 188 - -
Aed2g0537 188 PRINTS Ethylene responsive element binding protein signature 73 93 IPR001471 GO:0003700|GO:0006355
Aed2g0537 188 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Aed2g0537 188 CDD AP2 33 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0537 Aed-Chr2 3888017 3888583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0537 14 157 AP2-EREBP Transcription Factor Family AT1G01250 62.500 3.87e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed2g0537 AP2 7.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0537 K09286 - gmx:100806544 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0537 2 3888017 3888583 Aed2g0537 2 3888017 3888583 ECH
Aed2g2669 2 28839067 28839606 Aed2g0537 2 3888017 3888583 PCT