Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0535 ATGGCACATCTGGAGCGTAATCTGGGGGGCCCTGGGAGTGGAACTTCTCAACCGGTAAAAGGTTTGAAGGATGATGATCTGTATAGAGAGCTATGGAAGCTGTGTGCTGGGCCGTTGGTGGATGTTCCTCGTACTGGGGACAGAGTTTTCTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCTACGGATCAGGAATTGAACCAGGAAATTCCCCATTTCAATCTCCCGGCCAAGATTTTTTGCCGTGTTGTGAACATTCAGTTGTTGGCGGAACAAGACACTGATGAGGTTTATGCTTGCATCGCTTTGCTTCCGGAATCAGATCAAACCGAGCCTACAAATCCTGATCCAAATGTTTCTGAGGCCCCAAAACAGAAGTTTCACTCATTTTGCAAGATATTAACTGCCTCTGATACTAGCACACATGGAGGATTTTCGGTTTTGCGGAAGCATGCTACTGAGTGCTTGCCTCCATTGGACATGACACAAGCAACCCCAACTCAGGAGTTGGCAGCAAAAGATCTTCATGGATTTGAGTGGAAGGGAGAGCATGGGCAATTGAATGTTGGTGTTAGACGTTTAGCACGGCAGCAGAGTCCTATGCCTTCATCTGTGATATCAAGCCAGAGCATGCATCTGGGAGTGCTTGCCACTGCTTCCCATGCTGTCATGACTCGTACAATGTTTTTAGTTTATTACAAACCAAGGACTAGCCAGTTTATTGTTGGTTTGAACAAGTATCTGGAGGCAGTGAACAATAAATTTTCACTTGGCATGAGATTCAAGATGAGATTTGAGGGAGATGACTCACCTGAGAGAAGGTTTTCTGGTACTATTGTTGGGGTTGGAGACGTGTCTGCAGGGTGGTCAAATTCTCAGTGGCGCTCATTGAAGGTTCAATGGGATGAAGCAGCAACAATTCCAAGGCCTGATAGAGTTTCTTGTTGGGAGGTAGAGCCTTTTGTAGCTTCTACTGCTTTGAATGTCACACAAGCAGCAGTGAAGGGCAAAAGGTCTAGGCCTGTTGATGTTTCATCTTCTGCTGCCTCTGGTTTCTGGTATCATGGTTCTTCCAATGAGCTTAGTCAATTAGGTACTGCTGCCACTGCTGAGGTCCAAAGCAAGGAAAATCAGGTTGTTGGATGTTCTATGAGGCAGAAAGACATTATTAATTGCAATCCTATTAATGCTAAATCTAGCATCAGCTCTAGGGTCAGAATGGAAGGAGTATGGCCATCTTCACCACACTTGAATGTCACTCCAAACCTTTTTTCTGATCCCAATAACAACAACAATGGCGTTTCGGTGGCACGATCACCGATCTCTGGTGGTTATCCTAATGTTCAATCTAGATCAAGTGATGGCCCCACATGTGACCGTGGTGTGGAAGATGGGAAAAAGTCTGAGAATTCTCTTGATTGCTGGTTATTTGGAGTTAATTTGACTAACAATTGTTGTAGCAGCAATGTTATTACCATTCCTTCAAGTGTTGTTGTTACTCCTAGTGGTCCCAAAGAATCTATTCCTGCAGCTGCATGTGAAACTGAGAGGATTCAGAGTCCTAACTATTCACTGTCCAACAAGGGGCAGAAGCAAATTATTTCTGAGGCATCACCAAATGAGTGGCAGAACAAGCAGGCCACTGTACCATCCATGAGGACTCGGACTAAGGTGCAAATGCAAGGTGTTGCTGTTGGTCGTGCATTTGACTTGACCACGTTGAGTGGCTATGATGATCTCATAGATGAACTTGAGAAATTGTTTGATATCAGAGGAGAGCTGTGTTCACAAGACAAATGGGCTGTTACTTTCACAGATGATGAAAATGACATGATGCTTGTGGGTGATGATCCATGGCCAGAGTTCTGCAACATGGTGAAGAGGATTTTCATTTGTTCAAGGGAGGACTTGAAGAAGATGAAATGCAGCAAGCTACCTGCTTCTTCATCAGAAGTTGAAGAGACTCTATTGAGTCCAGATTCACAGAATAGGGATGAGACTCAACAGTCTCACATGCCTTTGCTAGCAACTTAG 2040 0.4466 MAHLERNLGGPGSGTSQPVKGLKDDDLYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTQATPTQELAAKDLHGFEWKGEHGQLNVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEAATIPRPDRVSCWEVEPFVASTALNVTQAAVKGKRSRPVDVSSSAASGFWYHGSSNELSQLGTAATAEVQSKENQVVGCSMRQKDIINCNPINAKSSISSRVRMEGVWPSSPHLNVTPNLFSDPNNNNNGVSVARSPISGGYPNVQSRSSDGPTCDRGVEDGKKSENSLDCWLFGVNLTNNCCSSNVITIPSSVVVTPSGPKESIPAAACETERIQSPNYSLSNKGQKQIISEASPNEWQNKQATVPSMRTRTKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFDIRGELCSQDKWAVTFTDDENDMMLVGDDPWPEFCNMVKRIFICSREDLKKMKCSKLPASSSEVEETLLSPDSQNRDETQQSHMPLLAT 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0535 679 Gene3D - 551 643 - -
Aed2g0535 679 MobiDBLite consensus disorder prediction 445 466 - -
Aed2g0535 679 ProSiteProfiles PB1 domain profile. 555 636 IPR000270 GO:0005515
Aed2g0535 679 PANTHER AUXIN RESPONSE FACTOR 11 13 186 - -
Aed2g0535 679 Gene3D - 129 201 IPR015300 -
Aed2g0535 679 SUPERFAMILY CAD & PB1 domains 551 631 - -
Aed2g0535 679 Gene3D - 256 328 - -
Aed2g0535 679 Pfam AUX/IAA family 598 637 IPR033389 -
Aed2g0535 679 Pfam AUX/IAA family 547 591 IPR033389 -
Aed2g0535 679 SUPERFAMILY DNA-binding pseudobarrel domain 122 224 IPR015300 -
Aed2g0535 679 MobiDBLite consensus disorder prediction 650 679 - -
Aed2g0535 679 MobiDBLite consensus disorder prediction 1 21 - -
Aed2g0535 679 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 184 650 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed2g0535 679 MobiDBLite consensus disorder prediction 646 679 - -
Aed2g0535 679 PANTHER AUXIN RESPONSE FACTOR 11 184 650 - -
Aed2g0535 679 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 186 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed2g0535 679 Pfam Auxin response factor 221 300 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0535 Aed-Chr2 3850883 3855828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0535 27 642 B3 DNA Binding Superfamily AT4G23980 49.396 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0535 K14486 - gmx:100790981 1202.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0535 2 3850883 3855828 Aed2g0535 2 3850883 3855828 ECH