Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0526 ATGGGAAGAGCTCCTTGTTGCTCCAAAGTGGGGTTGCACAAAGGTCCATGGACTCCTAAAGAAGATGCATTGCTTACCAAGTATATCCAAGCTCATGGAGAAGGCCAATGGAAATCACTACCCAAAAAAGCAGGGCTTCTTAGATGTGGAAAAAGTTGTAGATTGAGATGGATGAACTATCTGAGACCGGACATAAAGAGAGGGAACATTACCCCAGAAGAAGATGATCTAATAATCAGAATGCATTCACTTTTGGGAAATAGATGGTCCCTCATAGCAGGAAGGTTACCAGGGAGAACAGACAATGAAATAAAGAACTATTGGAACACCCATCTATGCAAAAAGATGAAGAATCAAGGAACTGAAGAAGACACAACAGACACAAACAACAACAACAACAACGCGTTAGAGGATCCTCAACAAGAGCCTCCCAATGGTAGTGGTGATGATGACGACAACAAAAAGAAGAACAAGAACGGTGGCAAAAAGAAGAGCAAGCAGAAGAAGAAGAACAAAGAGAAAGAAAATGCTGAGCCACCAAAGACCCAAGTTTACCTACCAAAACCAATTAGAGTCAAGGCTATGTATTTACAAAGAACGGATAGTAACACATCCAATTCCAATTCCAATTCGGCAAGTGGATCAACAAGCCAAGAAGAAGAGAAGGAGAAGAAAGTGGTTAGTGAAAGTGGTAATGTGCGAGAAGAAAGTGATGGTTTTGGGTTCTTGAACGAGGACCATGACTTAGTCAACGCCTCGGATATTGAGTGCTACTCTTATTTTCCAACAGATCATGGGACGCTACAGCAACTCTATGAAGAATACTTTCAGATCTTGAACATGGACATGGACCATACCCAATTTGAACTCAATTCATTTGCTGAATCTTTGTTAGAGTGA 900 0.4122 MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLCKKMKNQGTEEDTTDTNNNNNNALEDPQQEPPNGSGDDDDNKKKNKNGGKKKSKQKKKNKEKENAEPPKTQVYLPKPIRVKAMYLQRTDSNTSNSNSNSASGSTSQEEEKEKKVVSESGNVREESDGFGFLNEDHDLVNASDIECYSYFPTDHGTLQQLYEEYFQILNMDMDHTQFELNSFAESLLE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0526 299 PANTHER MYB TRANSCRIPTION FACTOR 1 286 - -
Aed2g0526 299 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 286 - -
Aed2g0526 299 MobiDBLite consensus disorder prediction 119 240 - -
Aed2g0526 299 Gene3D - 71 142 - -
Aed2g0526 299 MobiDBLite consensus disorder prediction 123 141 - -
Aed2g0526 299 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aed2g0526 299 CDD SANT 16 61 IPR001005 -
Aed2g0526 299 Gene3D - 14 66 - -
Aed2g0526 299 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aed2g0526 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aed2g0526 299 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aed2g0526 299 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aed2g0526 299 MobiDBLite consensus disorder prediction 217 232 - -
Aed2g0526 299 SMART sant 66 114 IPR001005 -
Aed2g0526 299 SMART sant 13 63 IPR001005 -
Aed2g0526 299 CDD SANT 71 112 IPR001005 -
Aed2g0526 299 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aed2g0526 299 MobiDBLite consensus disorder prediction 197 216 - -
Aed2g0526 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0526 Aed-Chr2 3781832 3783713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0526 4 146 MYB Transcription Factor Family AT3G13540 62.937 5.90e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g0526 Myb_DNA-binding 9.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0526 K09422 - gmx:100101857 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0526 2 3781832 3783713 Aed2g0526 2 3781832 3783713 ECH
Aed9g1001 9 7184426 7188437 Aed2g0526 2 3781832 3783713 PCT