Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0523 ATGAATTCTAGTACTGCCTTCACATTGCCTCTTTTAAGCAATGCGTTCAGGACTAGGGAACCTCATGATTTTGATGACGATATTGTGGAGAAAGATCCAACTGGCCGCTACATAAGGGGTTTGGGGGTGGTGGATGTGCTTCAATTACTTAGTTATAGGGGTTTTGATAAAGTTGATGGAATAGAAATTGCTTGGAACCAAATTAAGATTGATGGCCTCATGCATTCAGTAGATGATCTTGCGAAATTGTATTCAGAAGTTAATCTATTGAAGTTTTTGAATCATGACAATATCATTAAGTTCTATGATTCTTGGATTGATGATAAGAAAAATACTGTTAACATGATTACTGAACTCTTCACATCAGGAAATTTAAGACTATATCGTAAGAAGCATAAATATGTTGAAATGAAAGCTGTAAAAGGTTGGGCCAGACAAATTCTTCATGGCTTAGTATATCTTCACAGTCACAGGCCACCCATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTAAATGGAAACCAAGGTGAAGTTAAGATAGGGGACCTTGGTTTGGCAACTGTCATGCAACAACCAACCGCCCAAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGTCATACACTGAACTTGTTGACATCTATTCTTTTGGTATGTGCATATTGGAGATGGTTACTCTTGAGTATCCCTACAGTGAATGCAAAAATCCAGCTCAAATCTATAAGAAAGTTACCTCAGGCATCAAACCTGTTTCCCTTAATAAGATGAGTGATCACCAAGTTAAGGAGTTTATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTTAAAGATCCATTTCTACAAGTTGAGAATCCAAAGGATCCCATTCTTTATCCTTTACAACCAACTATCAGAACACAGAGATCATATTCAATCAGGTCTGGTGGTTCTCAATCTATTGACTTCGATTCTGACAACAAACAGTTTTCTATGAGTATCTGCTCTGAAAGCAACCAGGATAGTCCACATTGTCCTGTTTTTGAAGTGCAAAGGACAAATACAAACAATGAGTTTAGGTTGAAAGGGACTAAAAAAGATGATAATTCAGTATCATTGACCTTGCGTATAGCTGATACAAGTGGTCGAGTCCGGAATATACATTTTCTCTTTTACCTTGATACAGATACTGCAGTCTCTGTGGCCACAGAGATGGCTGAACATTTGGAGCTGGCAGATCATGATGTAGATTTCATAGCTGAGCTTATTGATTACTTGATAATGAAGCTTCTACCTTGGAGGAGGCCCTCCCGTGATCATTTCTCATATGGAGAATTTAGTTCTCATAGTACAAATTTAGATGGCCAAACCTTAATGGCATGGCCATGGAGTTCTGTCTTAACTAGTATTCCCTCAGAATTTGCTGTTGGTCAGGATGACTTCTCTGGGTTTGATACAACTCCCAAAGAATATTTTGGGGCAACTGAGAATAACAGCATTTCAAATAATGCTAATGATTCTACTTTTGAGGGTGAATATAATTCTTCTAGTCTGGTTAATTTGGAAGATCAATATTTAGAAGGATATACAGCTTCTGAGATGGTTGACGGAAATACTTCTATGAAAAATTGCAATTGCCTAGATTCTAATGCTAATGTAAGTTCTAAATGCTTAAGTAGTTCCATCTCTGAAGATGAGATTGGGGATGCATATTTTGAGGATTGTAAATTGGAACCAACAGAGTATTGTGTTGGGGAAGAAGGAGTCGTGGCTCTTGGAACATCTACTAATGTTGAGAGCTCAACAAGTAGTTCTAGTTTGTCATCAGAAAAGGACATTGATCATGAGCTAAAGTTTGAACTTGATGTAATTGAGGCACACTATCAGCATTGGATTGATGAACTTAATCAATTGAAGTTTGAGGCATTGGAATCTACTAGAAGGAGATGGGTGGCCAAGAAGAAATTGGTTGTTGTTTAG 1998 0.3774 MNSSTAFTLPLLSNAFRTREPHDFDDDIVEKDPTGRYIRGLGVVDVLQLLSYRGFDKVDGIEIAWNQIKIDGLMHSVDDLAKLYSEVNLLKFLNHDNIIKFYDSWIDDKKNTVNMITELFTSGNLRLYRKKHKYVEMKAVKGWARQILHGLVYLHSHRPPIIHRDLKCDNIFVNGNQGEVKIGDLGLATVMQQPTAQSVIGTPEFMAPELYEESYTELVDIYSFGMCILEMVTLEYPYSECKNPAQIYKKVTSGIKPVSLNKMSDHQVKEFIEKCLVPASERLSAEELLKDPFLQVENPKDPILYPLQPTIRTQRSYSIRSGGSQSIDFDSDNKQFSMSICSESNQDSPHCPVFEVQRTNTNNEFRLKGTKKDDNSVSLTLRIADTSGRVRNIHFLFYLDTDTAVSVATEMAEHLELADHDVDFIAELIDYLIMKLLPWRRPSRDHFSYGEFSSHSTNLDGQTLMAWPWSSVLTSIPSEFAVGQDDFSGFDTTPKEYFGATENNSISNNANDSTFEGEYNSSSLVNLEDQYLEGYTASEMVDGNTSMKNCNCLDSNANVSSKCLSSSISEDEIGDAYFEDCKLEPTEYCVGEEGVVALGTSTNVESSTSSSSLSSEKDIDHELKFELDVIEAHYQHWIDELNQLKFEALESTRRRWVAKKKLVVV 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0523 665 Gene3D Transferase(Phosphotransferase) domain 1 120 299 - -
Aed2g0523 665 SMART serkin_6 44 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0523 665 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 433 IPR024678 GO:0004674|GO:0005524
Aed2g0523 665 Gene3D Phosphorylase Kinase; domain 1 22 118 - -
Aed2g0523 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Aed2g0523 665 ProSiteProfiles Protein kinase domain profile. 35 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0523 665 Gene3D - 375 465 - -
Aed2g0523 665 Pfam Protein kinase domain 59 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0523 665 SUPERFAMILY Protein kinase-like (PK-like) 52 345 IPR011009 -
Aed2g0523 665 CDD STKc_WNK 52 294 - -
Aed2g0523 665 PANTHER KINASE DOMAIN PROTEIN 4 663 - -
Aed2g0523 665 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0523 Aed-Chr2 3734344 3739081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0523 27 443 MAP Kinase Kinase Kinase AT5G41990 58.629 1.40e-158 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed2g0523 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0523 K08867 - gmx:100809602 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0523 2 3734344 3739081 Aed2g0523 2 3734344 3739081 ECH