Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0519 ATGAAGGTTCTAATGGAGGAAAAACCATTCCCTGCATGGTCCTGGTCTGTTGAGCAGTGTTTGAAAGAGTATGGTGTGAAACTGGACAAGGGTCTGAGCACCTACGAGGTTCAGAAGCGGCGTGCGAAGTATGGTTGGAACGAGCTTGCCAAGGAGAAAGGGAAGCCCTTGTGGAAGCTTGTGTTGGAACAATTTGATGATATGCTTGTGAAGATACTTTTGGCTGCAGCTTTCATATCATTTCTTTTGGCCTACTTTCACGGAAGTGACGCAGATGAATCTGGATTTGAGGCATATGTGGAGCCTCTTGTGATAATTTTGATTCTGGTTCTTAATGCAATTGTTGGAGTTTGGCAAGAGAACAATGCAGAGAAGGCTCTTGAAGCTCTCAAAGAGTTGCAATGTGAGTCTGGAAAAGTGTTAAGGGATGGCTATTTTGTGCCTGATTTGCCTGCAAGGGAGCTTGTCCCTGGTGATATTGTGGAGCTGCATGTTGGAGATAAGGTCCCTGCTGACATGAGAGTCGCGACTTTGAAAACCTCGACTCTGCGCGTTGAGCAGAGTTCTTTAACGGGAGAAGCAATGCCGGTTCTCAAGGGGACAAGTCCTGTTTTCTTGGATGATTGTGAGTTGCAGGCTAAAGAGAACATGGTGTTTGCAGGCACCACTGTTGTCAATGGGAGTTGTGTTTGCATTGTTATCACCACAGGAATGGACACTGAAATTGGAAAGATACAGAAGCAGATACACGAGGCTTCTCAGGAGGAGAGTGACACCCCTTTGAAGAAGAAGCTTGATGAGTTTGGTAACAGGCTCACCACTGCAATTGGGGTGGTTTGTCTCATTGTTTGGATTATTAACTACAAGAATTTCATTTCTTGGGATGTTGTGGATGATGGATGGCCCTCAAACATCAAATTTTCATTCCAAAAGTGTACCTACTATTTCAAAATTGCTGTGGCTCTTGCTGTTGCTGCAATCCCTGAAGGCCTTCCTGCTGTTATCACAACATGTTTAGCACTCGGTACACGGAAAATGGCTCAAAAGAATGCAATCGTGAGAAAGCTTCCAAGTGTGGAGACTCTGGGATGCACCACTGTGATATGTTCAGATAAAACTGGTACTTTGACAACAAATCAGATGGCTGTGACAGAGTTCTTCACTTTGGGAGGGAAAACCACTGCTTCAAGGCTCATTAGTGTTGAAGGCACAACTTATGATCCCAAGGATGGTGGCATTGTTGATTGGGGGTGCTATAACATGGATGCTAATTTGCAAGTCATGGCTGAAATATGTGCTGTTTGTAATGATGCTGGGATTTACTTCGATAATCGCCTTTTTAGAGCCACGGGTTTGCCTACTGAAGCCGCTCTCAAAGTTTTGGTGGAGAAGATGGGAGGAGTTCCAGATGTGAAGTCAAGGAACAAAATTCGTGATAATGCACAACCTGCTGAAAACAACATGATGATGAATGGCAACACTGTGGTGAAGTTAGGATGCTGTGAGTGGTGGAATAAAAGATCCAAAAAGGTAGCTACTTTGGAGTTTGATCGAATTCGGAAGTCAATGAGTGTCATTGTTCGTGAACCAGATGGTCAAAATCGGATTCTTGTTAAGGGTGCTGTTGAGAGTTTACTGGAGCGTAGTTCACATGTGCAACTTGCTGATGGATCCTTGGTTCCAATAGATGATCAATGCAAGGAACTACTTCTTCAAAGACTTCAGGAGATGAGTTCAAAGGGATTGCGTTGCTTAGGTTTCGCATATAGCGACACCTTAGGAGAATTTTCAGACTATTATGCTGACACTCATCCTGCTCACAAGAAATTGCTTGATCCAACACACTACTCATCCATTGAAAGTGATCTAGTATTTGTTGGCATTGTTGGCTTAAGAGACCCTCCTCGTGAGGAAGTTCACAAAGCAATTGAAGACTGTAAGGAAGCTGGGATTAGAGTTATGGTGATAACTGGAGATAATAAGTCAACAGCAGAGGCTATTTGTAGGGAAATCAAATTGTTCTCTAAAGATGAGGATCTCACAGGGAAAAGTTTGACTGGTAAGGAATTCATCTCTCTTTCTCATGCAGAACAAGTTAAGATATTGTTGAGACCTGGAGGCAAGGTTTTCTCTCGAGCTGAGCCTAGACACAAGCAAGAAATTGTTAGACTATTGAAGGAAATGGGGGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTCAAGCTTGCCGACATAGGGATTGCTATGGGCATAACTGGGACAGAGGTTGCAAAAGAAGCTGCAGATATGGTGCTTGCAGATGACAATTTTAGTACCATAGTTTCAGCTATTGCTGAGGGTCGTTCTATTTATAATAACATGAAGTCATTTATCAGGTACATGATATCATCCAATGTTGGGGAAGTAATATCCATATTCTTGACAGCTGCTCTGGGGATCCCAGAATGCATGATACCAGTGCAACTTCTGTGGGTGAATTTGGTCACTGACGGTCCACCTGCAACAGCTCTTGGTTTTAACCCTGCTGATGTTGATATCATGCAAAAGCCACCTCGCAGAAGTGATGATCCTCTAATAACATCTTTTCTTGGCATAAATCTTGTGAGTGATGGTCACACAATCATAGAATTGTCCCAGCTTCGCAACTGGGGGGAGTGTCCCTCATGGTCTAATTTCACTGTTGCTCCATTTGAGGTTGCTGGGGGTAGATTGATCACATTTTCAAATCCTTGTGACTATTTCTCAGTTGGAAAAGTAAAGGCCATGACTCTGTCTCTCTCAGTCTTGGTGGCAATTGAGATGTTTAACTCTTTGAATGCCCTCTCAGAGGAGAATAGCTTGAGGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTGGCTATGTCAATATCATTAGGACTCCATTGCTTCATACTCTACACTCCATTCCTTGCAGAAGTGTTTGGTGTTATTCCACTTAGTTTGAATGAGTGGCTAATGGTCCTTTTGATATCAGCACCTGTTATTCTGATTGATGAGTTTCTAAAATTAGTGGTGAGGAGTCAAAGAAGGTTGTTGACTAAGGAGAAAGAAGCATGA 3096 0.4325 MKVLMEEKPFPAWSWSVEQCLKEYGVKLDKGLSTYEVQKRRAKYGWNELAKEKGKPLWKLVLEQFDDMLVKILLAAAFISFLLAYFHGSDADESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPDLPARELVPGDIVELHVGDKVPADMRVATLKTSTLRVEQSSLTGEAMPVLKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGKIQKQIHEASQEESDTPLKKKLDEFGNRLTTAIGVVCLIVWIINYKNFISWDVVDDGWPSNIKFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLISVEGTTYDPKDGGIVDWGCYNMDANLQVMAEICAVCNDAGIYFDNRLFRATGLPTEAALKVLVEKMGGVPDVKSRNKIRDNAQPAENNMMMNGNTVVKLGCCEWWNKRSKKVATLEFDRIRKSMSVIVREPDGQNRILVKGAVESLLERSSHVQLADGSLVPIDDQCKELLLQRLQEMSSKGLRCLGFAYSDTLGEFSDYYADTHPAHKKLLDPTHYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAICREIKLFSKDEDLTGKSLTGKEFISLSHAEQVKILLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEAADMVLADDNFSTIVSAIAEGRSIYNNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDPLITSFLGINLVSDGHTIIELSQLRNWGECPSWSNFTVAPFEVAGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRKLPPWRNPWLLVAMSISLGLHCFILYTPFLAEVFGVIPLSLNEWLMVLLISAPVILIDEFLKLVVRSQRRLLTKEKEA 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0519 1031 Pfam E1-E2 ATPase 134 349 - -
Aed2g0519 1031 SFLD C1.7: P-type atpase like 350 787 - -
Aed2g0519 1031 SUPERFAMILY HAD-like 367 839 IPR036412 -
Aed2g0519 1031 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 307 394 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed2g0519 1031 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 708 820 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed2g0519 1031 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 8 868 - -
Aed2g0519 1031 Gene3D - 366 780 IPR023214 -
Aed2g0519 1031 Pfam haloacid dehalogenase-like hydrolase 366 749 - -
Aed2g0519 1031 Gene3D - 63 1019 - -
Aed2g0519 1031 Gene3D - 379 634 IPR023299 GO:0000166
Aed2g0519 1031 PRINTS P-type cation-transporting ATPase superfamily signature 735 754 - -
Aed2g0519 1031 PRINTS P-type cation-transporting ATPase superfamily signature 627 638 - -
Aed2g0519 1031 PRINTS P-type cation-transporting ATPase superfamily signature 369 383 - -
Aed2g0519 1031 PRINTS P-type cation-transporting ATPase superfamily signature 649 659 - -
Aed2g0519 1031 PRINTS P-type cation-transporting ATPase superfamily signature 759 771 - -
Aed2g0519 1031 PRINTS P-type cation-transporting ATPase superfamily signature 186 200 - -
Aed2g0519 1031 PANTHER CALCIUM-TRANSPORTING ATPASE 871 1026 - -
Aed2g0519 1031 Pfam Cation transporting ATPase, C-terminus 820 1017 IPR006068 -
Aed2g0519 1031 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 871 1026 - -
Aed2g0519 1031 Pfam Cation transporter/ATPase, N-terminus 13 80 IPR004014 -
Aed2g0519 1031 PRINTS Sodium/potassium-transporting ATPase signature 959 983 - -
Aed2g0519 1031 PRINTS Sodium/potassium-transporting ATPase signature 362 383 - -
Aed2g0519 1031 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 1021 IPR023298 -
Aed2g0519 1031 Gene3D - 30 252 - -
Aed2g0519 1031 ProSitePatterns E1-E2 ATPases phosphorylation site. 371 377 IPR018303 -
Aed2g0519 1031 PANTHER CALCIUM-TRANSPORTING ATPASE 8 868 - -
Aed2g0519 1031 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 376 631 IPR023299 GO:0000166
Aed2g0519 1031 SMART Cation_ATPase_N_a_2 11 85 IPR004014 -
Aed2g0519 1031 SUPERFAMILY Calcium ATPase, transduction domain A 140 248 IPR008250 -
Aed2g0519 1031 SFLD p-type atpase 350 787 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0519 Aed-Chr2 3709444 3714465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0519 6 1028 Primary Pumps ATPases(2) AT4G00900 75.355 0.0 1621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0519 K01537 - gmx:100792952 1939.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0519 2 3709444 3714465 Aed2g0519 2 3709444 3714465 ECH