Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0508 ATGGAATATACTTATTCAGCAGAAGCTGCAGAGGCAGAAACTTACACAAGTAGCAGCACCACCCTATCAAGATCAAAGAAGAGAAACAACAACGACAACAACATCAACACAAGAAGGTTCAGTGATGAACAAATCAAATCATTGGAGACTATGTTTGAGTCAGAGTCAAGGCTTGAGCCTAGAAAGAAGTTGCAGCTGGCAAGAGAGCTTGGATTGCAGCCAAGACAGCTGCAGAAGCTAAATCATCTAATGCAGAAGCCATCATTGGACGCAAATCAGAGATGCACACAAGTTGAAGCAGCAGCAAACAGCATGGACAGTGAATCAGAAAATGGAGGGACCATGAAATGCGAAGGTGAGGGAAAGCCAAGCCCATCATCATTGGAAAGATCAGAACATTTACATGGTGTGTCAGATGATGACACAAGCTGCATAAAAGTTGAAGACTTTGGCCTAGAAGATGAACATGGCCTTCTGAATTTTGGTGAGCATGCTGATGGTTCCTTGACTTCACCAGAAGATTGGAGTGCTTTTCAATCCTATGATCTATTATTAGGCCAATCAACCAGTGATTACCAATGGTGGGACTTCTGGTCCTGA 600 0.4317 MEYTYSAEAAEAETYTSSSTTLSRSKKRNNNDNNINTRRFSDEQIKSLETMFESESRLEPRKKLQLARELGLQPRQLQKLNHLMQKPSLDANQRCTQVEAAANSMDSESENGGTMKCEGEGKPSPSSLERSEHLHGVSDDDTSCIKVEDFGLEDEHGLLNFGEHADGSLTSPEDWSAFQSYDLLLGQSTSDYQWWDFWS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0508 199 MobiDBLite consensus disorder prediction 1 40 - -
Aed2g0508 199 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 11 76 IPR045224 GO:0003700
Aed2g0508 199 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 76 199 IPR045224 GO:0003700
Aed2g0508 199 SUPERFAMILY Homeodomain-like 26 78 IPR009057 -
Aed2g0508 199 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7 11 76 - -
Aed2g0508 199 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7 76 199 - -
Aed2g0508 199 Gene3D - 40 79 - -
Aed2g0508 199 Pfam Homeodomain 38 78 IPR001356 GO:0003677
Aed2g0508 199 CDD homeodomain 38 79 IPR001356 GO:0003677
Aed2g0508 199 MobiDBLite consensus disorder prediction 100 139 - -
Aed2g0508 199 MobiDBLite consensus disorder prediction 10 40 - -
Aed2g0508 199 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0508 Aed-Chr2 3612778 3614187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0508 5 199 Homeobox Transcription Factor Family AT2G46680 36.328 9.35e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed2g0508 Homeodomain 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0508 K09338 - gmx:100811208 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0508 2 3612778 3614187 Aed2g0508 2 3612778 3614187 ECH