Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0505 ATGTTGGAGGAGAGTGAAGAAAACACCAACTTGGAAGAAGTAGTAGTTCCGGTTACAAATCAGCACCAACATAGAAAGAAAGTGGTGGTTAAAGACATACCAAAAGGGTTTTTGCCAATAAAGGTAGGGCAAGGTGAAGAGCAACAAAAGATTGTGATGCCTATTATGTATCTGAACCACCCTTTGTTTTCTCAGCTACTCAAAGAGGCAGAGGAAGAGTATGGTTTTGATCAACAAGGAACCATAATCATCCCTTGCCATGTCAAGGACTTTAGGTACGTTCAAAGCCTCATTGATAAGGACAAATCCTCCCAACAACACCAACACCATGTCATAAGCTGCTTTAGGCCTTCATGTTAA 360 0.4111 MLEESEENTNLEEVVVPVTNQHQHRKKVVVKDIPKGFLPIKVGQGEEQQKIVMPIMYLNHPLFSQLLKEAEEEYGFDQQGTIIIPCHVKDFRYVQSLIDKDKSSQQHQHHVISCFRPSC 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0505 119 Pfam Auxin responsive protein 27 97 IPR003676 GO:0009733
Aed2g0505 119 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 19 111 - -
Aed2g0505 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0505 Aed-Chr2 3592995 3593354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0505 32 106 Calmodulin-binding Proteins AT3G43120 43.590 9.96e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0505 K14488 - gmx:100808516 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0505 2 3592995 3593354 Aed2g0505 2 3592995 3593354 ECH
Aed2g2687 2 28934730 28934981 Aed2g0505 2 3592995 3593354 PCT