Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0504 ATGGGTATAGGGGAGAAGAGTCCGAGCAAGAGTTTCCAACATCGTGAAGGAGGAGGGAAGAAGCAAGAATTCAGAGGGGTTCCAAAAGGGTGCATGGCAATTAAAGTTGGTCAAGGAGAAGAGCAACAGAGGTTCGTGGTGCCTGTGATTTACATAAACCACCCTCTGTTCATGCAGCTTCTCAAAGAGGCAGAGGAAGAGTATGGCTTTGACCAAAAGGGCACCATAACCATCCCTTGCCATGTTGAGGAATTCAGAAACGTTCGTGGCTTGATTGATAGGGACAAGTCCCTTCACCACCACCACCACAACCATTGTTTGGTGTATGTGGAAAGGAAAAGCCGTAGGCTTAGGAGAGGCTATCTATTCTATGGTTCAGGAATATCAAAGTTTTTTTCACTATCATCTTTGGCTGCTATATAG 423 0.4563 MGIGEKSPSKSFQHREGGGKKQEFRGVPKGCMAIKVGQGEEQQRFVVPVIYINHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHNHCLVYVERKSRRLRRGYLFYGSGISKFFSLSSLAAI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0504 140 MobiDBLite consensus disorder prediction 1 24 - -
Aed2g0504 140 Pfam Auxin responsive protein 23 88 IPR003676 GO:0009733
Aed2g0504 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 108 IPR003676 GO:0009733
Aed2g0504 140 PANTHER SMALL AUXIN-UP RNA-RELATED 19 108 - -
Aed2g0504 140 MobiDBLite consensus disorder prediction 9 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0504 Aed-Chr2 3586219 3587977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0504 27 104 Calmodulin-binding Proteins AT5G20810 45.570 1.65e-17 73.2