Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0503 ATGGGCCAGTGCTATGGTAAATCCAATCTCACGCCGGAAAATGACGCCACCGATGCCCCCACCGCCGAGACCACCGCTGTCGTTGCCGGATCCGGCGATGTCCCGCCCTCTCCGCTGCCGGCGAAGGACACGCCCGCGCGGGCCAGCCCCTGGCCGAGTCCCTACCCTCAAGGCGGCGGCGTGACGCCGTCTCCGGCCAGGGGCACGCCGAGAAGATTCTTCCGGCGGCCGTTTCCGCCGCCTTCGCCGGCGAAACACATAAGGGCTTCACTCGCGAAGCGGCTCGGGCACGCGAGGGCGCCCAAGGAGGGGCCGATCCCGGAGGAGGAGGCGGCGGCGGCAGCGGCGGAGCAGTCGCTGGATAAGAGCTTTGGGTATGGTAAGAATTTTGGGGCGAAATTCGAAATTGGGAAGGAAGTGGGGCGAGGGCATTTTGGTCATACTTGCTATGCTAAGGGGAAGAAGGGTGAACTCAAAGACCAACCTGTTGCAGTTAAAATCATTTCCAAGTCCAAGATGACTACTGCAATTGCAATTGAAGATGTTCGCAGGGAGGTGAAGATATTAAAAGCTCTATCTGGCCATAAACATCTCGTCAAATTTCATGATGCTTTTGAGGATGGCAACAATGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGAAGTATTCGGAGGAGGATGCCAAGGTTATAATTTTGCAGATCCTAAGCGTAGTTGCGTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACCTGAAACCTGAGAATTTCCTCTTCACTTCGAGAAGTGAAGATGCTGACATGAGGCTTATTGATTTTGGTCTTTCTGACTTCATCCGTCCAGATGAACGGCTGAATGACATTGTTGGGAGTGCGTATTATGTTGCACCTGAGGTCCTTCACAGGTCGTATAGTCTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCCTATTATGTGGAAGTCGACCTTTCTGGGCAAGGACAGAATCTGGAATTTTCCGTGCAGTGCTTAGAGCCGATCCTAACTATGATGATTTACCTTGGCCTACTGCCTCTGCAGAGGCCAAGGACTTTGTGAAAAGGCTCCTAAACAAGGACTACAGAAAAAGACTGACAGCTGTCCAGGCTCTATCTCATCCTTGGTTGAGGGATGACAGCTGTCCCATCCCTTTGGATATATTAATTTTTAAACTAGTGAAGGCTTATCTTCATGCAACACCATTCAAACGTGCAGCAGTGAAGGCCCTTTCAAAAGCCTTGCCAGAGGATCAATTGCCCTACCTACGGGCACAATTCAGATTGTTGGAACCAAATAGAGACGGGCACATCTCCCTCGATAATTTCAAAATGGCTCTTGTACGCAATGTAACTGATGCCATGAGGGAGTCAAGGGTTCTTGAGATCGTAAATGCGATGGAGCCACTTGCCTATAGAAAGATGGACTTTGAAGAATTTTGTGCAGCTACAATCAGCACCTATCAATTGGAAGCACATGAGAGGTGGGAAGATATTGCTTCAACTGCTTTTGAACATTTTGAGATAGAAGGCAATCGTGTGCTATCAGTTGAAGAATTAGCCAGAGAGTTGAATCTTGGACCTTCAGCTTATTCAGTACTCAAAGATTGGATCAGAAATACTGATGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGAAACCGGTAG 1728 0.489 MGQCYGKSNLTPENDATDAPTAETTAVVAGSGDVPPSPLPAKDTPARASPWPSPYPQGGGVTPSPARGTPRRFFRRPFPPPSPAKHIRASLAKRLGHARAPKEGPIPEEEAAAAAAEQSLDKSFGYGKNFGAKFEIGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKSKMTTAIAIEDVRREVKILKALSGHKHLVKFHDAFEDGNNVGSFLTEFCQGKYSEEDAKVIILQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMRLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNYDDLPWPTASAEAKDFVKRLLNKDYRKRLTAVQALSHPWLRDDSCPIPLDILIFKLVKAYLHATPFKRAAVKALSKALPEDQLPYLRAQFRLLEPNRDGHISLDNFKMALVRNVTDAMRESRVLEIVNAMEPLAYRKMDFEEFCAATISTYQLEAHERWEDIASTAFEHFEIEGNRVLSVEELARELNLGPSAYSVLKDWIRNTDGKLSLLGYTKFLHGVTLRSSNPRNR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0503 575 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Aed2g0503 575 CDD STKc_CAMK 133 384 - -
Aed2g0503 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Aed2g0503 575 MobiDBLite consensus disorder prediction 1 85 - -
Aed2g0503 575 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 568 - -
Aed2g0503 575 Gene3D Phosphorylase Kinase; domain 1 130 219 - -
Aed2g0503 575 ProSiteProfiles Protein kinase domain profile. 134 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0503 575 MobiDBLite consensus disorder prediction 38 59 - -
Aed2g0503 575 MobiDBLite consensus disorder prediction 1 21 - -
Aed2g0503 575 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Aed2g0503 575 SUPERFAMILY EF-hand 419 564 IPR011992 -
Aed2g0503 575 Gene3D Transferase(Phosphotransferase) domain 1 220 392 - -
Aed2g0503 575 Gene3D - 393 565 - -
Aed2g0503 575 SUPERFAMILY Protein kinase-like (PK-like) 126 404 IPR011009 -
Aed2g0503 575 PANTHER CDPK-RELATED KINASE 3 50 568 - -
Aed2g0503 575 Pfam Protein kinase domain 134 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0503 575 SMART serkin_6 134 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0503 Aed-Chr2 3558819 3568056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0503 37 569 EF-hand Containing Proteins AT3G50530 58.204 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed2g0503 Pkinase 3.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0503 - - gmx:100796256 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0503 2 3558819 3568056 Aed2g0503 2 3558819 3568056 ECH