Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0502 ATGCCCAAGCCTTCTCATCCATTTGTTCCATTCAACCTCACTCTTCCAACCTCATCACAACACACACTCATGGAGGAACTAATCATATCTCCTTCTTCATCTTCCTCTTTGGTCTCCCTGCCCCAAGAAAACCAAACACAAACACTTCAACAGAAACTTCAATTTCTCCTCCAAAGCCAACCCGATGGGTGGGTCTACGCCATCTTCTGGCAAGCCTCACACGACGACAATGGCAACCTTTACTTATCCTTCGGAGAGGGCCATTTCCAAGGCACCAAAGAAACTTCTTCCCCTAAATTACTAACCACTAAGAAGTTCATGATGAAAACACCCTCAAACGACAACATCAACGACGCCGAGTGGTTCTACGTCATGTCGTTGACTCGCACCTTCCCTGTCAACAATAATGCTTCTTCTAATAATTCAACCTCTCCTTCACTCCCTTGCAAGTCCTTCGCTTTAGGCACCGTGCTCTGGCTCAACAACAAGCACGAGCTCCAATTCTACAGCTGCGAGAGGTCCAACGAGGCCCACGTGCACGGGATCCAAACCTTAATCTGCATCCCCACACAAAACGGCGTCGTCGAAATGGGCTCCTACGACACCATCCAACAAAACTGGAACCTCGTACAACATGTGAAGTCTCTCTTCCAAACCCCGCCAGATCCGGTTCCTGTCCAAATCCACCACGACACCCACACCATCTCCTTCGCCGACATCGGCATCGTTGCCGAAGTCCAAGAAACCAAAAAACGGAAACAAATTACTACCCAAACAGCACCCAGAAAAAACGACAACTATGTCGACTCCGAACACTCCGATTCGGATTGCCCAACGTTGCCAACTGCTACCACCACGACAACCTCGGAGCCGAAGAAAAGAGGGAGAAAACCAATTCTCGGACGCGAGACTCCGGTAAACCACGTGGAGGCAGAGCGACAACGTAGGGAGAAGCTCAACCATCGTTTCTACGCCTTACGAGCCGTGGTTCCGAATGTTTCGAGGATGGACAAGGCTTCGTTGTTGTCCGACGCTGTCTCCTACATCAACGACCTCAAAGCGAAGATTGAGTACTTGGAGTCGCAGCAGCCAAGAGAGGGTAGTAAAAAAGTCAAGACAGAAATGGCGGATACTCTGGACAACCAGAGCACCGCCACGACGTCGACCGTCGTCGACCAGAGCGGGCCCGGGCCTGGGTCTAGATCAGGCTCAGGCCCAGGCCCGCATGGACTCGAGGTGGATGTGAGGATCGTGGGACCCGATGCCATGGTGAGGGTACAATCAGAAAATGTGAACCACCCTGGGGCGAGGCTAATGGGCGCTTTGAGAGACCTAGAGTTTCAGGTTCACCACGCTAGCATGTCAACTGTTAATGATCTCATGCTTCAAGATGTGGTCGTTAAGGTTCCCAGTGGAATATTGAGGAGTGAAGAGCATCTTAAATCTGCCATTCTCATGAGGTTGGATCGGTGA 1473 0.5092 MPKPSHPFVPFNLTLPTSSQHTLMEELIISPSSSSSLVSLPQENQTQTLQQKLQFLLQSQPDGWVYAIFWQASHDDNGNLYLSFGEGHFQGTKETSSPKLLTTKKFMMKTPSNDNINDAEWFYVMSLTRTFPVNNNASSNNSTSPSLPCKSFALGTVLWLNNKHELQFYSCERSNEAHVHGIQTLICIPTQNGVVEMGSYDTIQQNWNLVQHVKSLFQTPPDPVPVQIHHDTHTISFADIGIVAEVQETKKRKQITTQTAPRKNDNYVDSEHSDSDCPTLPTATTTTTSEPKKRGRKPILGRETPVNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINDLKAKIEYLESQQPREGSKKVKTEMADTLDNQSTATTSTVVDQSGPGPGSRSGSGPGPHGLEVDVRIVGPDAMVRVQSENVNHPGARLMGALRDLEFQVHHASMSTVNDLMLQDVVVKVPSGILRSEEHLKSAILMRLDR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0502 490 MobiDBLite consensus disorder prediction 377 400 - -
Aed2g0502 490 MobiDBLite consensus disorder prediction 362 376 - -
Aed2g0502 490 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 352 IPR011598 GO:0046983
Aed2g0502 490 MobiDBLite consensus disorder prediction 273 289 - -
Aed2g0502 490 PANTHER MYC 24 488 IPR045084 GO:0003700|GO:0006355
Aed2g0502 490 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 304 364 IPR036638 GO:0046983
Aed2g0502 490 MobiDBLite consensus disorder prediction 250 315 - -
Aed2g0502 490 CDD bHLH_AtAIB_like 301 377 - -
Aed2g0502 490 MobiDBLite consensus disorder prediction 290 315 - -
Aed2g0502 490 Gene3D - 301 366 IPR036638 GO:0046983
Aed2g0502 490 SMART finulus 309 358 IPR011598 GO:0046983
Aed2g0502 490 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 217 IPR025610 -
Aed2g0502 490 MobiDBLite consensus disorder prediction 362 411 - -
Aed2g0502 490 Pfam Helix-loop-helix DNA-binding domain 307 352 IPR011598 GO:0046983
Aed2g0502 490 PANTHER TRANSCRIPTION FACTOR BHLH14 24 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0502 Aed-Chr2 3548238 3549710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0502 49 488 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 38.816 3.87e-78 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed2g0502 bHLH-MYC_N 1.1e-47 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0502 - K13422 gmx:100804965 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0502 2 3548238 3549710 Aed2g0502 2 3548238 3549710 ECH