Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0494 ATGGGGAAGAAGGGGAGTGGTAGTTCATGGTTAACCGCTGTCAAAAGGGCATTCAGATCTCCAACCAAAGACACTGACAAAAGGAGTAGCAGAAGAAGAGAAGACTGTGATCAAGATGAAGACGAAGAAAAGAAGAGGGAAAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCATGAAGGAGTGAACAACAACACTACTACTCAACAAAAGTTGAAGCCTGATGTGGCAGCAAGTGAGGGTTCAAGAACAGAGCAGGATCAAAAGCATGCACTTGCGGTGGCGGTGGCCACTGCAGAAGCCGCCATGGCCACCGCTCAGGCGGCGGCGGAGGTGGCAAGGTTGTCAAAACCTGCTAGCCTTGCCAGGGAGCATTATGCTGCTGTTGTGATCCAAACTGCTTTCAGAGGGTATCTTGCTAGAAGAGCACTTCGTGCATTAAAGGGGTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAACGTTAGGAAGCAGGCAAAGATGACCCTGAGGTGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTTCTTGACCAACGCATAAGGTCTTCAATTGAAGGTAGTAGAAAATCCACTTTCAGTGACACTGCTAGTGTTTGGGACTCGCGCTATCTTCAGGACATTTCAGATAGGAAATCAATATCAAGAGAGGGAAGCAGCATTACAGATGACTGGGATGAAAGGCATCACACAGTTGAAGAAGTGAAGGCCATGTTGCAGCAGAGGAAGGAAGCTGCTGCAATGAAGAGGGACAAGACCCTATCCCAAGCCTTTTCCCAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGAAATGAAGATGAATTGGAAGAGAGGCCAAAATGGCTAGATAGGTGGATGGCAACAAAGCCATGGGAGAATAGAGGAAGGGCTTCAACTGATCAAAGAGACCCCATTAAGACTGTGGAGATTGACACATCTCAGCCTTATTCATATCTAGGAACCAACTATAGAAGATCACATCCAAATTATCAATACAACCCAAACCATCACCAACCACAAAGGCATTCCATTGCTTCCCCACTCCATAGATCTCATCAAAACAATGGATCCCTTCACCAGTCCCCTGCCACCCCTTCTCCTGCCAAATCAAGGCCTATCCAAGTCCGATCTGCGAGTCCACGTTGTGTTAGAGACGACAGAACCTCCCAGACACCAAGCCTGAGGTCTAATTACCACTACACAGGAAACTTGTACCAAAATGGAAGGGTTGTTGGAACTGGAACAGGAACTAGTAGTGGTGGTGGTGGTGGTGGTGCTACATTGCCTAATTACATGGCGGCAACCGAGTCTGCAAAGGCTCGAATTCGGTCACAAAGCGCACCGAGGCAGAGGCCTTCCACACCAGAGAGGGATAGAACTGGATCAGTAAAGAAAAGGCTTTCTTTTCCAGCTCCTGACCCTTATAGTGTGGGAGTGAGTTATGGAAATTATGGACATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTTGTTAGTGGATCACACTTTGGATTAGAGCAACAATCAAACTACTCTTCTTGCTACACTGAGAGTGTTGGTGGTGGTGGTGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGGAGGTGGTTGAGATGA 1644 0.472 MGKKGSGSSWLTAVKRAFRSPTKDTDKRSSRRREDCDQDEDEEKKREKRRWIFRKTHMSHEGVNNNTTTQQKLKPDVAASEGSRTEQDQKHALAVAVATAEAAMATAQAAAEVARLSKPASLAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSIEGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSITDDWDERHHTVEEVKAMLQQRKEAAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNNGSLHQSPATPSPAKSRPIQVRSASPRCVRDDRTSQTPSLRSNYHYTGNLYQNGRVVGTGTGTSSGGGGGGATLPNYMAATESAKARIRSQSAPRQRPSTPERDRTGSVKKRLSFPAPDPYSVGVSYGNYGHSLRSPSFKSVVSGSHFGLEQQSNYSSCYTESVGGGGEVSPSSTGDLRRWLR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0494 547 MobiDBLite consensus disorder prediction 394 410 - -
Aed2g0494 547 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Aed2g0494 547 Pfam IQ calmodulin-binding motif 152 168 IPR000048 GO:0005515
Aed2g0494 547 MobiDBLite consensus disorder prediction 318 383 - -
Aed2g0494 547 SMART iq_5 147 168 IPR000048 GO:0005515
Aed2g0494 547 SMART iq_5 124 146 IPR000048 GO:0005515
Aed2g0494 547 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 6 547 - -
Aed2g0494 547 Pfam Protein of unknown function (DUF4005) 389 494 IPR025064 -
Aed2g0494 547 MobiDBLite consensus disorder prediction 446 482 - -
Aed2g0494 547 MobiDBLite consensus disorder prediction 19 57 - -
Aed2g0494 547 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Aed2g0494 547 MobiDBLite consensus disorder prediction 521 547 - -
Aed2g0494 547 PANTHER IQ-DOMAIN 5-RELATED 6 547 - -
Aed2g0494 547 MobiDBLite consensus disorder prediction 421 440 - -
Aed2g0494 547 MobiDBLite consensus disorder prediction 1 90 - -
Aed2g0494 547 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Aed2g0494 547 MobiDBLite consensus disorder prediction 302 410 - -
Aed2g0494 547 MobiDBLite consensus disorder prediction 59 76 - -
Aed2g0494 547 MobiDBLite consensus disorder prediction 302 317 - -
Aed2g0494 547 Gene3D - 123 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0494 Aed-Chr2 3485897 3489040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0494 10 547 IQD Protein Family AT4G00820 57.549 6.63e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0494 - - gmx:100786729 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0494 2 3485897 3489040 Aed2g0494 2 3485897 3489040 ECH