Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0492 ATGCCGGAAAACAGTATGAGCATATCAGTGAATGGACAATCTCAAGTCCCTCCTGGCTTCAGGTTTCACCCAACTGAGGAAGAGCTTCTTCAGTACTACTTGAGGAAGAAGGTCTCTTACGAGAAGATTGACCTCGATGTCATTCGTGACGTTGATCTCAACAAGCTCGAGCCATGGGACATACAAGCTTCTTTGTTTTGCGTCTCACATGGGGGGGTTTCGAATGTGATGGGGGATGGTGGTCAGGAAGAAGGGTGGGTGGTGTGTAGGATATTCAAGAAGAAGAACCATCTGAAAACCCTAGACAGCCCATTGGCTTCAGGTGAAGGAGGAAGAAGGAGCCACTTGTTTGACTCGTGCGACGAGGGTGCTTTGGAGCAAATACTTCAACAAATGGGAAGAGGATCATGCAAGGAAGAGAGCAGCTACGAAGGAAGCTACAACTGCAACAGCAGCTTTGGAAGGTTTAATGGAAGGCCTTATGATCAGAACAATGGCGGCGGATATAATGACAACAGGTTCATGAAGCTGCCGAGCCTAGAGAGCCCGAAATCCGCAAGCATGGAGAGCCAGCACAACAATAATGGTGATACTAATAACAATGAGCAGAACAATAATGGGTACCATCCCATAATTCCAGTAGTAGAGATGGGCACGGACAATGAAGGGTCATTCGCAACGCACCAGGTGAGTGGTGGTGACCCAAACATGGTGGTTCATCCAATGGAGGTAGGATCGGGTGGTGGAGGCCTCTCCAACTGGGCTGCTTTGGACCGTTTAGTTGCATCTCAACTCAATGGCCAGACCGATGCCTCTAGGCAACTCGCATGTGCCTTCAACGACCCCACCATCATCACCATGGGCTACTGCACCAGCGTCGACCATGATGATCTTCATCATCAAATTCCCACCCTCCGATCCTCATCATCATCAACACCAACAGCGTCAGCGTCAGCGTCCGCACATGCTAGACCTTCCCCTGCACCCGCATTCATCAACCCCACAACACAGGACTTCACCAGCGAGATTGACCTTTGGAACTTCACCCGATCCACCTCTTCCCTGTTGGCATCCTCCGAACCACTCTGCCACGTGTCCAACACGTCAGTCTAG 1113 0.5049 MPENSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQASLFCVSHGGVSNVMGDGGQEEGWVVCRIFKKKNHLKTLDSPLASGEGGRRSHLFDSCDEGALEQILQQMGRGSCKEESSYEGSYNCNSSFGRFNGRPYDQNNGGGYNDNRFMKLPSLESPKSASMESQHNNNGDTNNNEQNNNGYHPIIPVVEMGTDNEGSFATHQVSGGDPNMVVHPMEVGSGGGGLSNWAALDRLVASQLNGQTDASRQLACAFNDPTIITMGYCTSVDHDDLHHQIPTLRSSSSSTPTASASASAHARPSPAPAFINPTTQDFTSEIDLWNFTRSTSSLLASSEPLCHVSNTSV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0492 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 64 - -
Aed2g0492 370 Pfam No apical meristem (NAM) protein 17 69 IPR003441 GO:0003677|GO:0006355
Aed2g0492 370 MobiDBLite consensus disorder prediction 303 334 - -
Aed2g0492 370 MobiDBLite consensus disorder prediction 183 206 - -
Aed2g0492 370 ProSiteProfiles NAC domain profile. 16 155 IPR003441 GO:0003677|GO:0006355
Aed2g0492 370 MobiDBLite consensus disorder prediction 160 206 - -
Aed2g0492 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 76 310 - -
Aed2g0492 370 MobiDBLite consensus disorder prediction 303 321 - -
Aed2g0492 370 Gene3D NAC domain 25 75 IPR036093 GO:0003677|GO:0006355
Aed2g0492 370 SUPERFAMILY NAC domain 11 94 IPR036093 GO:0003677|GO:0006355
Aed2g0492 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 76 310 - -
Aed2g0492 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0492 Aed-Chr2 3440346 3443586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0492 1 62 NAC Transcription Factor Family AT2G46770 88.710 2.43e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed2g0492 NAM 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0492 - - gmx:100793308 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0492 2 3440346 3443586 Aed2g0492 2 3440346 3443586 ECH