Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0486 ATGGTGGGTGGTAACATCAATTCAAGGCAATACAATAATGATACAACTTGTACCAAAATCTTTGTTGGAGGGTTAGCTTGGGAGACTCAAAGGGACACAATGAGAAGGTACTTTGAGCAGTTTGGAGAGATCTCAGAGGCTGTTGTTATCACAGACAAGGACACTGGGAAATCCAAGGGTTATGGTTTTGTCACATTCAAGGATCCGGAGGCAGCAAAGAAAGCATGTCAGAACCCCTCTCCAATAACTGATGGAAGAAGGGCAAACTGTAATATGGCATCAATTGGTGCAAACAAGAACCGGACTCAGGCTCCACAACATGGAGGGTTTAGAGCAGCACCTGGTGTATTGGCCTCACCTACTTATCATGGCCCTTCCTCTACCTATGTCCATCAAAACAGTGGCCAATACACATTTCCTTATTCAAGTTTCGGATATACTGGATATTCACAAGACACAATGTACCCCATGAACTGCTATGGGGTATTTGGAGATCAACATTTCTCAACTCACTACCCCTCCAATGGGGCATCTGGGCCAGTGGGATTGGTCCATAACATTTACCCTTTTAGTGCACAATATCCATACAATAGCCAGGCTCAGGCTCATTGTTTTAGAGTCCAATATCCACAAATGATGCAGTTTCCAATTCTCCCTAGCCCTGGGCACTATGGTTCAGCTGGTATCCTTGCACTTCCTTCTTCAATGGAAATGCCAACTATTAGTGCAGGTAAAAGTTAA 741 0.4413 MVGGNINSRQYNNDTTCTKIFVGGLAWETQRDTMRRYFEQFGEISEAVVITDKDTGKSKGYGFVTFKDPEAAKKACQNPSPITDGRRANCNMASIGANKNRTQAPQHGGFRAAPGVLASPTYHGPSSTYVHQNSGQYTFPYSSFGYTGYSQDTMYPMNCYGVFGDQHFSTHYPSNGASGPVGLVHNIYPFSAQYPYNSQAQAHCFRVQYPQMMQFPILPSPGHYGSAGILALPSSMEMPTISAGKS 246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0486 246 SMART rrm1_1 19 91 IPR000504 GO:0003723
Aed2g0486 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 95 IPR000504 GO:0003723
Aed2g0486 246 PANTHER BOULE-RELATED 1 244 IPR037366 GO:0003729
Aed2g0486 246 PANTHER - 1 244 - -
Aed2g0486 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 78 IPR000504 GO:0003723
Aed2g0486 246 Gene3D - 4 111 IPR012677 -
Aed2g0486 246 CDD RRM_RBM24_RBM38_like 18 93 - -
Aed2g0486 246 SUPERFAMILY RNA-binding domain, RBD 10 106 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed2g0486 Aed-Chr2 3395961 3397496 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0486 12 94 C2H2 Transcription Factor Family AT2G19380 42.169 9.47e-17 77.4
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0486 2 3395961 3397496 Aed2g0486 2 3395961 3397496 ECH