Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0480 ATGGATGCACAAAGCTCTCAGCATACACAAGTTATTGAGATCAGTGGAGATTGTCCTGATGGTGGAAGGAAGATCTGTGGGGAAGCACCATGTGGGTTTGCAGATGCTGGATCCATCTCTAAGGATTCTGAAGAAAGATCAACCTCTATGCGAAAACTTTTCATGGCAGTGGTCCTTTGTGTTATTTTCATGGCCTTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATATTGACTGATGCTGCACATTTGCTTTCAGATGTTGCCGCCTTTGCTATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGGATTCTGGTATACGAAGCCATTGATAGAATCATTTCCGCTCCTAAAGATGTGGATGGTTTTTTAATGTTTTTAGTTGCTGCATTTGGTCTTGTAGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCACGGACATGGACATGATGGTCATGGTCATGGTCACAGTCACGGACATGGACATGATGGTCATGGCCACAGTCATGTATTTACAGTGTCTAGCCATCATGATTCAAAGCATACAAAAGATGATCACCATCACACACATGATGATCATGCACACCATGATGAAGACCATCCAAAAGATGCTCACCATCATACTGATGAAGACCATCGTGCTCACAAAGAGGTTACTGAACCTCTTCTTGGTGAATCAAAAGATGGAACTAAGAAGAAGAAGCAATGGAATGTAAATATAAGGGGGGCTTATCTCCATGTTCTTGGGGACTCTATCCAGAGTATTGGGGTAATGATTGGAGGAGGAGCCATATGGTATAACCCTCGTTGGCAAATAGTTGATTTAGTCTGCACCCTAATCTTTTCAGTAATTGTTTTGGGGACAACTATCAATATGCTGCGAAACATTTTAGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGGGGTTTGCTGGATATGGAAGATGTAGTGGCTGTTCATGAACTGCATATATGGGCCATTACTGTGGGAAAGGTTTTGCTTGCTTGTCATGTTAAAATCACACGTGAAGCAGATGCAGATGTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTTTATAACATCAGCCATGTCACTATACAGATAGAGCGCTAG 1248 0.4223 MDAQSSQHTQVIEISGDCPDGGRKICGEAPCGFADAGSISKDSEERSTSMRKLFMAVVLCVIFMAFEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIISAPKDVDGFLMFLVAAFGLVVNIIMALLLGHDHGHGHGHDGHGHGHSHGHGHDGHGHSHVFTVSSHHDSKHTKDDHHHTHDDHAHHDEDHPKDAHHHTDEDHRAHKEVTEPLLGESKDGTKKKKQWNVNIRGAYLHVLGDSIQSIGVMIGGGAIWYNPRWQIVDLVCTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKITREADADVVLDKVIDYIKRVYNISHVTIQIER 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0480 415 Gene3D Cation efflux protein transmembrane domain 49 336 IPR027469 -
Aed2g0480 415 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 338 IPR027469 -
Aed2g0480 415 MobiDBLite consensus disorder prediction 200 267 - -
Aed2g0480 415 PANTHER METAL TOLERANCE PROTEIN A1 1 415 - -
Aed2g0480 415 Pfam Cation efflux family 53 337 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed2g0480 415 TIGRFAM CDF: cation diffusion facilitator family transporter 50 415 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed2g0480 415 MobiDBLite consensus disorder prediction 182 267 - -
Aed2g0480 415 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 343 414 IPR036837 -
Aed2g0480 415 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0480 Aed-Chr2 3352938 3357347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0480 1 415 Inorganic Solute Cotransporters AT2G46800 66.825 1.55e-179 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0480 K14689 - gmx:100794876 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0480 2 3352938 3357347 Aed2g0480 2 3352938 3357347 ECH