Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0477 ATGGCTCCATCATTGGAAACTGAAAACGGTGAAGCCACGCACCTCAAACACGTTGAAGAAGAGCAAGATGGGATCCTTTTCGCGATGAACATGATGTCTACTATGGTGTATCCATTTGCGGCGAGGACTGCGATTGAGCTTGGGATCTTTGACATCATAGCAAAATCGGGTGAAGGTGCGAAGCTCTCAGCGGAGGACATAGCAGTTAAGATTGGCACAAAGAACCCAGAAGCACCAGCAATGTTGGACCGTCTTCTCAGGTTATTGGCAAGTCACTCTATGCTATCTTCAACTCTTGATGATCATGCCCAAAAGAGCCTCTATAGTCTCACATATGCATCCAAGTTTTTTGTCACCGATGCTGATGGTGTCTCGTTCGGACCTACCTTCAACTTGCTTCACGACAAAGTCTTCTTGGAAAGCTGGACCGAACTGAAAGGAGCCATATTGGAAGGGGGTGTAGCATTCAACAGGGCTCATGGCATGCACTCATTTGAGTACCCAGCTGTCGATCCTAGGTTCAATGATGTTTTCAACAAAGCTATGTTCAACCTTACTACTATAGTCATGAAGAGGGTTCTTGAATTCTACCAAGGTTTTGAGAACATTAATAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAATCTCAACCTAATCACTTCTAAATATCCACATGTTCAAGGTGTCAATTTTGACTTGCCACATGTCATAGAGCATGCCCCTACTTACTCCGGTGTGAAACATGTAGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGACGCCATTTTTATGAAGAATTGCTATAAAGCTATTCCTAGTGATGGAAAAGTGATTGTTGTGGACTTAATGCTTCCCATTTTGCCTGAGAGCACAGTTACTGCTAAGAATGGTTTCCAATCTGACCTCTTAATGATGACTCAAAACTCAGGAGGGAAAGAAAGAACCCAAAATGAGTTCATGGAATTAGCATTAGGTTCTGGATTCAGTGGCATCACATTCGTTTGTTGTGTCTCTGGCTTCTGGGTCATGGAGTTTTATAAGTAG 1050 0.4362 MAPSLETENGEATHLKHVEEEQDGILFAMNMMSTMVYPFAARTAIELGIFDIIAKSGEGAKLSAEDIAVKIGTKNPEAPAMLDRLLRLLASHSMLSSTLDDHAQKSLYSLTYASKFFVTDADGVSFGPTFNLLHDKVFLESWTELKGAILEGGVAFNRAHGMHSFEYPAVDPRFNDVFNKAMFNLTTIVMKRVLEFYQGFENINRLVDVGGGLGINLNLITSKYPHVQGVNFDLPHVIEHAPTYSGVKHVGGDMFESVPNGDAIFMKNCYKAIPSDGKVIVVDLMLPILPESTVTAKNGFQSDLLMMTQNSGGKERTQNEFMELALGSGFSGITFVCCVSGFWVMEFYK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0477 349 PANTHER O-METHYLTRANSFERASE 1 349 IPR016461 GO:0008168
Aed2g0477 349 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 349 IPR016461 GO:0008168
Aed2g0477 349 Gene3D - 5 117 IPR036388 -
Aed2g0477 349 PIRSF O-mtase 5 349 IPR016461 GO:0008168
Aed2g0477 349 Gene3D Vaccinia Virus protein VP39 118 349 IPR029063 -
Aed2g0477 349 SUPERFAMILY "Winged helix" DNA-binding domain 19 120 IPR036390 -
Aed2g0477 349 Pfam Dimerisation domain 42 90 IPR012967 GO:0046983
Aed2g0477 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 348 IPR029063 -
Aed2g0477 349 Pfam O-methyltransferase domain 142 331 IPR001077 GO:0008171
Aed2g0477 349 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0477 Aed-Chr2 3329563 3332543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0477 13 349 Monolignol Biosynthesis Gene Families AT5G54160 47.899 3.70e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0477 K13066 - gmx:100789402 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0477 2 3329563 3332543 Aed2g0477 2 3329563 3332543 ECH