Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0476 ATGGCTCCATCATTGGAAAACAAAACCGATGAAACCGTAAACCCTAAACACGTTGAAGAGGAACAAGATGCGATCCTTTTCGCGATGAACATGACGACTACCATGGTGTATCCATTAGCAGTGAAGACCGTGATTGAGCTTGGGATCTTTGACATCATAGCAAAAATGGGTGAAGGTGCGAAGGTCTCAGCGGAGGACATAGCAGTTGAGCTTGGCACAACGAACCCAGAAGCACCAGCAATGTTGGACCGTCTTTTCAGGTTATTGGCAAGTCACTCTATGCTATCTTCAACTCTTGATGATCATGCCCAAAAGAGCCTCTATAGTCTCACCTATGCCTCCAAGTATTTTGTCACTGATGCTGATGGTGTCTCAATCGGACCTGGCGTCAACGTGCTTCAGAGCAAGGTCTACTTGGAAAGCTGGACCGAACTGAAAGGAGCCATATTGGAAGGGGGTGTAGCATTCAACAGAGCTCATGGCATGCACTCATTTGAGTACCCAGCTGTCGATCCTAGGTTCAATGATGTTTTCAACAAAGCTATGTTCAACCTTACTACTATAATCATGAAGAGGGTTCTTGAACTCTACCAAGGTTTTGAGAACATTAATAGACTTGTGGATGTTGGTGGTGGTCTTGGGATCAATCTCAACCTAATCACTTCTAAATATCCACATGTTCAAGGTGTTAATTTTGACTTGCCTCATGTCATAGAGCATGCCCCTACTTACCCCGGCGTGGAACATGTAGGAGGAGATATGTTTGAGAGTGTTCCTAATGGAGACGCCATTTTTATGAAGTGGATACTTCACGATTGGAGTGATGAGCAGTGCTTGAGGTTGTTGAAAAATTGCCATAAATCTATTCCAAGTGATGGAAAAGTGATTGTTATCGAGTATGTGCTTCCCGTTCTGTCCGAGAGCACGGTTTCTGCTAAGACCGGTTTCCAAATGGACGTCATAATGATGACTCAATGTCCAGGAGGAAAAGAGCGAACCAAGAATGAGTTCATAGAATTGGCATCAGGTTCTGGATTCAGTGGCATTACATTTGTTTGTTGTGCCTCTGGCTTCTGGGTTATGGAGTTTTACAAGTAG 1098 0.4417 MAPSLENKTDETVNPKHVEEEQDAILFAMNMTTTMVYPLAVKTVIELGIFDIIAKMGEGAKVSAEDIAVELGTTNPEAPAMLDRLFRLLASHSMLSSTLDDHAQKSLYSLTYASKYFVTDADGVSIGPGVNVLQSKVYLESWTELKGAILEGGVAFNRAHGMHSFEYPAVDPRFNDVFNKAMFNLTTIIMKRVLELYQGFENINRLVDVGGGLGINLNLITSKYPHVQGVNFDLPHVIEHAPTYPGVEHVGGDMFESVPNGDAIFMKWILHDWSDEQCLRLLKNCHKSIPSDGKVIVIEYVLPVLSESTVSAKTGFQMDVIMMTQCPGGKERTKNEFIELASGSGFSGITFVCCASGFWVMEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0476 365 Gene3D Vaccinia Virus protein VP39 118 365 IPR029063 -
Aed2g0476 365 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Aed2g0476 365 Pfam O-methyltransferase domain 142 347 IPR001077 GO:0008171
Aed2g0476 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 365 IPR016461 GO:0008168
Aed2g0476 365 PANTHER O-METHYLTRANSFERASE 1 365 IPR016461 GO:0008168
Aed2g0476 365 PIRSF O-mtase 5 365 IPR016461 GO:0008168
Aed2g0476 365 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 365 - -
Aed2g0476 365 SUPERFAMILY "Winged helix" DNA-binding domain 19 120 IPR036390 -
Aed2g0476 365 Gene3D - 6 117 IPR036388 -
Aed2g0476 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 364 IPR029063 -
Aed2g0476 365 CDD AdoMet_MTases 205 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0476 Aed-Chr2 3325551 3327836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0476 9 365 Monolignol Biosynthesis Gene Families AT5G54160 52.078 3.21e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0476 K13066 - gmx:100789402 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0476 2 3325551 3327836 Aed2g0476 2 3325551 3327836 ECH