Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0474 ATGGACGCATACTCCTCTGGCGGCGAAGAAGTGGTTGTTAAGATCAGAAAACCGTATACAATCACAAAGCAAAGAGAGCGATGGACCGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTGAAACTGCACGGGCGAGCATGGCAGCGCATAGAAGAGGCCCTTGTAAAGGGTGTTCCAATTGGACAGGCTCTTGATATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAACAATCCTTATCCACGGAAGACCAAGATTGGTACCGGATCATTACATAGTAGAGAAAAGGATGGAAAACTCAATTTATTTGAATCTTCACATGTTAACCAAGCACTGGACTTGGAAAAAGAACCACTTCCAGAGAAACATGATTTAGATGAAGGGCCGACAACTGTAAAAGTAAATAAGGATGAGAAGCGTGCAAAAGTATTTACTCTTCTCCAGGAGGTACCCTGTTCCTCTGTATCTTCAGCAAACAACAGTTCAATAACAATGTCAGTGCCACGGGGAAATTCATGCGCCTTCAAGGAGATTATACCTTCAGTGAAAGAGGTCATAGCACGAGATGAAAAAACTGAATCTTTTGTCACTATTGAACTTGAAAATGGGAAGTTGGAGATCAATGATGGAAAACAGCCTAATGGCACTAGTCAAGGCTACACGTTAGAGAATTCTGATGCTTTACACATGAAATTGGTTCAAAATGAGAAAACAGATGGTCTTGATTGTGCATTAACAATAGATGGGATGCAAGGCAATCAGAATTACCCTAGACATGTTACTGTGCACGTTGTTGACGGGAACCTTGGAACAAGTACTCAAAATCCATCACAAGATATGTTGTTTCAAGACTCCATGTTTCAGCCAATAGGAGGGGTTAACGGGAAACCAAATGTTTTCACCAATTCAGCTCCATCGAACACAAGTGAAAGTCCAAATAACACTGCACGATCTTCTGTTCATCAATCATTTCTTCCTTATCCTCCCTTCACACAACACAATCAAGACAATTACCAATCATTTCTTCACATGTCTTCAACATTTTCAAATCTTGTTGTCTCTACCTTGATGCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTTGCAGCTACATTTTGGCCCTATGCAAATCCAGAAACTTCAGCAAATTCTCCTATGACGGAAGTTCCATCAATGAATACCTGTGAAGCACCGGCACTGAAGGCAGAGCAAGAAAAAACTACTCTACAAAATCCTCCTCTTCAAGATCAGATGCTGGATCCAGAATACACTGAAGCTCAACAAGCTCAACATTCAGCTTCAAAGTCACCAGCTACCATTTTATCAGATTCTGAGAGTGGAGATGCCAAGTTAAATACTTCATCAAAGGCTACTGATCATGAGACGAATAAAACCATTTCCGAGCACCTTGATTCCAACAAAGCAAAGGGAAGAAAACCGGTTGACCGTTCCTCATGTGGTTCCAACACGGCCTCTAGCAGCGATGTGGAAACTGATGCATTAGAGAAGGGTGAAAAAGGGAAGGAAGAGGCTGAAATACCTGATGCTAACCATTTAGCCATTGAGTTCAGTAATCGTCGTAGAACTATTACCAACCTTACTGATTCTTGGAAAGAGGTCTCTGAAGAGGGGAGACTGGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCTCCTCAAGCTTTCAAGAATAAGGATCATCAAATGGACGCCACCAATGATAACAAGCAAAATATGGATGACAAAAATGAAGATCTTGACAGCAGGAAATACAATTCTAATTATGAAGCAATGCAGAAAATCCTGTCATTTGTAGAAAATAACGAGGGACTGTTAACCATTGGGCTTGGACAAGGAAAGCTCAAGACTCGTCGAACAGGCTTTAAACCCTACAAAAGATGTTCCATGGAGAGCAAGGAAAATAGGGTTGGAGGGAGCAGCAATCAAGGTGAAGAGAAATGTTGCAAGAGAATACGTTTGGAAGGGGAGACTTCGACTTGA 2019 0.4215 MDAYSSGGEEVVVKIRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTKIGTGSLHSREKDGKLNLFESSHVNQALDLEKEPLPEKHDLDEGPTTVKVNKDEKRAKVFTLLQEVPCSSVSSANNSSITMSVPRGNSCAFKEIIPSVKEVIARDEKTESFVTIELENGKLEINDGKQPNGTSQGYTLENSDALHMKLVQNEKTDGLDCALTIDGMQGNQNYPRHVTVHVVDGNLGTSTQNPSQDMLFQDSMFQPIGGVNGKPNVFTNSAPSNTSESPNNTARSSVHQSFLPYPPFTQHNQDNYQSFLHMSSTFSNLVVSTLMQNPAAHAAASFAATFWPYANPETSANSPMTEVPSMNTCEAPALKAEQEKTTLQNPPLQDQMLDPEYTEAQQAQHSASKSPATILSDSESGDAKLNTSSKATDHETNKTISEHLDSNKAKGRKPVDRSSCGSNTASSSDVETDALEKGEKGKEEAEIPDANHLAIEFSNRRRTITNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPQAFKNKDHQMDATNDNKQNMDDKNEDLDSRKYNSNYEAMQKILSFVENNEGLLTIGLGQGKLKTRRTGFKPYKRCSMESKENRVGGSSNQGEEKCCKRIRLEGETST 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0474 672 PANTHER SWI/SNF COMPLEX-RELATED 376 654 - -
Aed2g0474 672 PANTHER SWI/SNF COMPLEX-RELATED 2 52 - -
Aed2g0474 672 CDD SANT 27 50 IPR001005 -
Aed2g0474 672 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 54 IPR017930 -
Aed2g0474 672 MobiDBLite consensus disorder prediction 65 97 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 455 482 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 425 518 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 425 454 - -
Aed2g0474 672 Gene3D - 27 60 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 658 672 - -
Aed2g0474 672 Pfam Myb-like DNA-binding domain 25 52 IPR001005 -
Aed2g0474 672 MobiDBLite consensus disorder prediction 499 517 - -
Aed2g0474 672 PANTHER PROTEIN LHY 52 373 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 562 593 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 484 498 - -
Aed2g0474 672 PANTHER PROTEIN LHY 376 654 - -
Aed2g0474 672 PANTHER PROTEIN LHY 2 52 - -
Aed2g0474 672 Coils Coil 575 595 - -
Aed2g0474 672 SUPERFAMILY Homeodomain-like 19 53 IPR009057 -
Aed2g0474 672 MobiDBLite consensus disorder prediction 296 329 - -
Aed2g0474 672 PANTHER SWI/SNF COMPLEX-RELATED 52 373 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 643 672 - -
Aed2g0474 672 MobiDBLite consensus disorder prediction 573 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0474 Aed-Chr2 3306449 3312647 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g0474 Myb_DNA-binding 3.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0474 K12133 - gmx:100271888 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0474 2 3306449 3312647 Aed2g0474 2 3306449 3312647 ECH