Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0471 ATGAATATTATTCATGATCATCTTCAGTCTCCAGAGACAACTGAATCTCACAATTCATCATCTGGGTTAGGGTTGTTACACCAGCAACAGGATGCAGCAGGTTCCAATTTCATGATCAACACCAATCATCAGCATCAACATCAACATCATCACCACCACCAGCAGCTAGACTTCATGGACTTGTCACTTGGGAGCCGCAAGGATAATGAAGGGAATTTGCAAGGATCAGGAGGTGGTGGTGGTGGTGGTGCTGCTGCTGCTTCTTCTGTCTATGCTCATCATCATCATCATCATCATGCAAGTGCTAGTTCTTCTGCCAATGGTAACAACAACAACAACCTGCCGCAGCAGCAGCAGCAGCCTCCTGCTGAGAAGGAGCACATGTTTGATAAAGTAGTGACACCAAGTGATGTGGGGAAGCTGAACCGTTTGGTGATACCAAAGCAGCATGCTGAGAAGTATTTCCCTCTTGATTCCTCAGCGAATGAGAAGGGGCTGTTGCTGAATTTTGAGGACAGGAATGGGAAGTTGTGGAGGTTCAGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGATGACCAAAGGGTGGAGCCGTTTTGTTAAAGAGAAGAAGCTTGATGCTGGTGACATTGTTTCCTTCCAGCGTGGTGTTGGAGAATTGTATAGGCATAGGTTGTACATAGATTGGAGGAGAAGGCCTGATCATCATCACCATCATGGCCCTGACCCTTCAACCACACTCTTCACTCCTTTCTTTCTTCCCAATCAGCCACACTTAATGTCCATCAGATGGGGTAGTGCTACTGGCAGATTGTACTCCCTCCCTACCCCAACCCCACCACGCCACCATGACCATTTGCAACAACAGCAGCAACAACAACAACACCTCAATTACAACTCCATGTATCATCCCTTTCACCACCATGGTGCTGGAAGTGTAAATGGTACTACTCATCACTACAACAATAACAACAACTATCATGAGATGAGTAGTACTTCAGGATCTGGCTCAGTCTTTTACCTCAGGTCAACACCCCCATCAATGCCATTGGCTGATCATCAAACCTTGAACACAAGGCAACAACAACAACAACAACAAGAGGGAGGCAATGTTTCTCTTTCCCCTATGATCATTGATTCTGTTCCTATTGCTCACCACCTCCATCATCAACAACAACACCATGGTGGTGGTAAGAGTGGTTCTAGTACTAGTCCTAGCACTGCAGGGAAAAGACTAAGATTATTTGGGGTCAACATGGAATGTGCTTCTTCAACATCAGAAGACCCCAAATGCTTCAGCTCGTTGTCCTCATCTTCAATGGCTAATTCCAATTCACCACCACTTCAGCTTTTGAGGGAAGACACACTTTCATCATCAGCAGCAGCAAGGTTTGGGGATCAGAGAGGAGGGGAACCTTCAATTCTTTTTGATCTGGACCCTTCTTTGCAATACCGGCAGTGA 1464 0.4611 MNIIHDHLQSPETTESHNSSSGLGLLHQQQDAAGSNFMINTNHQHQHQHHHHHQQLDFMDLSLGSRKDNEGNLQGSGGGGGGGAAAASSVYAHHHHHHHASASSSANGNNNNNLPQQQQQPPAEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELYRHRLYIDWRRRPDHHHHHGPDPSTTLFTPFFLPNQPHLMSIRWGSATGRLYSLPTPTPPRHHDHLQQQQQQQQHLNYNSMYHPFHHHGAGSVNGTTHHYNNNNNYHEMSSTSGSGSVFYLRSTPPSMPLADHQTLNTRQQQQQQQEGGNVSLSPMIIDSVPIAHHLHHQQQHHGGGKSGSSTSPSTAGKRLRLFGVNMECASSTSEDPKCFSSLSSSSMANSNSPPLQLLREDTLSSSAAARFGDQRGGEPSILFDLDPSLQYRQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0471 487 MobiDBLite consensus disorder prediction 395 409 - -
Aed2g0471 487 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 66 445 - -
Aed2g0471 487 MobiDBLite consensus disorder prediction 310 371 - -
Aed2g0471 487 SUPERFAMILY DNA-binding pseudobarrel domain 125 230 IPR015300 -
Aed2g0471 487 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 66 445 IPR044800 GO:0003700
Aed2g0471 487 Gene3D - 123 241 IPR015300 -
Aed2g0471 487 MobiDBLite consensus disorder prediction 315 371 - -
Aed2g0471 487 MobiDBLite consensus disorder prediction 1 24 - -
Aed2g0471 487 Pfam B3 DNA binding domain 129 233 IPR003340 GO:0003677
Aed2g0471 487 MobiDBLite consensus disorder prediction 424 487 - -
Aed2g0471 487 ProSiteProfiles B3 DNA-binding domain profile. 129 234 IPR003340 GO:0003677
Aed2g0471 487 MobiDBLite consensus disorder prediction 388 409 - -
Aed2g0471 487 MobiDBLite consensus disorder prediction 102 123 - -
Aed2g0471 487 MobiDBLite consensus disorder prediction 424 463 - -
Aed2g0471 487 SMART B3_2 129 234 IPR003340 GO:0003677
Aed2g0471 487 CDD B3_DNA 127 216 IPR003340 GO:0003677
Aed2g0471 487 MobiDBLite consensus disorder prediction 64 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0471 Aed-Chr2 3261586 3263049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0471 123 425 RAV Transcription Factor Family AT2G46870 48.052 1.83e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aed2g0471 B3 2.3e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0471 - - gmx:100781424 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0471 2 3261586 3263049 Aed2g0471 2 3261586 3263049 ECH