Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0469 ATGGGTGACCCTGGCCCAGTTGTTGGATACAGATTCCATCCAACTGATGAAGAACTTGTAGGGCACTACTTGAACCACAAGTTACTTGCTAATGGTAACATTTCCACACTGCATGATGATGTCATAGCTGAAGTTGATGTTTGCAACTTTGAGCCTTGGAATTTACCTGCATTTTCCAAGAGAGGTTTTGTCTTGTGTCGCTTAATCAACAAAGATAAGAAAACAGAAAGGGAAACTGATACATTGATACATGATGAAGGGGAGTCAAGTATTGCTGCTGACTTTGAAAAGCAAGAATTTGAGTATATCATTCAAAGTGTATTTACTTTGCCAGAAGTGAGTCTGGAATCAATCTTTCCATCACTACAAAAGTCTACAATTGGCATTGAAAAGGAACCATCTTCCCAAAGTTCCTCAATTCCTAATGCTCATTTTGGGGAGCGAAACAGTGTTATGCTTATTCCATTGGAAACCATTGAAGAGAAAAAGTTCTTGGAAGGAATTTTAGTTTGTAATGCGGATTCACCAACTCATACCCAATTGAAGATAGACTCATCGACCACACACTCTCAAACGTCGATGCGGAAGCGAGCACGTGGAAGTGGAGAAAGCAGTGACATCGAAGTTAATTTTGTTTGTGCAAATTCTCTTGTTGCTAATAATTGTCCATTGCAAGAAGAGAAAAGACTTGATTCTGTTGATTGGAGCTCTATTTTATGTGATATAGACTCTGAAGAGGATATCCAGTTTTTATGGAACAAGTGGTTTCCTTTAGATGGTGTTGACCAACACCTTACCGAAGTGAAGGATGAGGAAGAAGTTCAAAAGCTTGGCCTAAAACGTACTTGTGGAGATATCAAAGCATATCAGTGTGGTCAACTAAATGTTGAAAAGAATGAAGTGATGGATAGCCTTAAAGATGAAGTTGATCGAGTGATCCTACGTGTATCTGAATTAGCAGAAGAGCTTGTTGCAACCAAAGTTAAAGCCAATCAAGTTGAAGATTTAGAGAGAAATCTGGCATATATGCATGGTCAGCTGAGATATGCTCTCGAGGATGTTGAAAAACTTACTGCTTTGAAGGATCATTTAAAAGGGCAACATAAGTTTGGCAACTTCGTGCAAGCAATGATGGGTAGTCTAAGTCCTATTTCAATGCCCGTGGGATACAGATTTCATCCAAGTGATGAAGAACTTGTGGGTCACTACTTGAAGCACAAGTTGCTTGGTAATGAGTCCACAGAGGATGTGCATAATGTCATAGCTCAGATTCATGTTTGCCACTTTGAGCCTTGGGACTTACCAGTACACAAAGATCGTAAATTCTACGGTATTAGAGGTTTTGTCTTGTGTCGCTTAATCAACAAAGCTGCTGAGGAAAAAGTAGAAGGAGGAATTGATACATTGAAACATGATGAAGGGGAGGCAAGTTACCATGTTGCTGCTGCCTTTGAAAACCAAGAAACTGAGGGTAGTATTTCAAGTGTATATACATTGCCAGAAGTGAATTTGGAATCAATCTTTCCAACACCACCTCAGGCACTACAACAGTCTTCAATTGTCATTGAACAGGAACCGTCTTCCCAAGGTTTCTTGCTTTCCAATGCCTATTTTGGGGAGGAAAACAGCATTGTGCATACTCCATTTGAAACCATTGAAGAGGAAGAAGACCATGTTGATAGTATATACATTGATAAGTTCTTGAATGAAGTTTTAGTTGGCGAGGATGGTTTTAACAGTAATGAAACAATACCTGCTTTTGTTATAGAAGCAATCCTGCTTTGA 1785 0.3933 MGDPGPVVGYRFHPTDEELVGHYLNHKLLANGNISTLHDDVIAEVDVCNFEPWNLPAFSKRGFVLCRLINKDKKTERETDTLIHDEGESSIAADFEKQEFEYIIQSVFTLPEVSLESIFPSLQKSTIGIEKEPSSQSSSIPNAHFGERNSVMLIPLETIEEKKFLEGILVCNADSPTHTQLKIDSSTTHSQTSMRKRARGSGESSDIEVNFVCANSLVANNCPLQEEKRLDSVDWSSILCDIDSEEDIQFLWNKWFPLDGVDQHLTEVKDEEEVQKLGLKRTCGDIKAYQCGQLNVEKNEVMDSLKDEVDRVILRVSELAEELVATKVKANQVEDLERNLAYMHGQLRYALEDVEKLTALKDHLKGQHKFGNFVQAMMGSLSPISMPVGYRFHPSDEELVGHYLKHKLLGNESTEDVHNVIAQIHVCHFEPWDLPVHKDRKFYGIRGFVLCRLINKAAEEKVEGGIDTLKHDEGEASYHVAAAFENQETEGSISSVYTLPEVNLESIFPTPPQALQQSSIVIEQEPSSQGFLLSNAYFGEENSIVHTPFETIEEEEDHVDSIYIDKFLNEVLVGEDGFNSNETIPAFVIEAILL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0469 594 Gene3D NAC domain 15 88 IPR036093 GO:0003677|GO:0006355
Aed2g0469 594 Gene3D NAC domain 395 463 IPR036093 GO:0003677|GO:0006355
Aed2g0469 594 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 60 - -
Aed2g0469 594 MobiDBLite consensus disorder prediction 180 202 - -
Aed2g0469 594 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 387 439 - -
Aed2g0469 594 ProSiteProfiles NAC domain profile. 386 539 IPR003441 GO:0003677|GO:0006355
Aed2g0469 594 ProSiteProfiles NAC domain profile. 6 176 IPR003441 GO:0003677|GO:0006355
Aed2g0469 594 Pfam No apical meristem (NAM) protein 387 451 IPR003441 GO:0003677|GO:0006355
Aed2g0469 594 Pfam No apical meristem (NAM) protein 8 77 IPR003441 GO:0003677|GO:0006355
Aed2g0469 594 PANTHER FACTOR, PUTATIVE-RELATED 8 60 - -
Aed2g0469 594 PANTHER FACTOR, PUTATIVE-RELATED 387 439 - -
Aed2g0469 594 Coils Coil 302 322 - -
Aed2g0469 594 MobiDBLite consensus disorder prediction 180 198 - -
Aed2g0469 594 SUPERFAMILY NAC domain 375 438 IPR036093 GO:0003677|GO:0006355
Aed2g0469 594 SUPERFAMILY NAC domain 4 80 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0469 Aed-Chr2 3243458 3250204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0469 8 59 NAC Transcription Factor Family AT4G35580 55.769 1.37e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed2g0469 NAM 8.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0469 - - ccaj:109803958 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0469 2 3243458 3250204 Aed2g0469 2 3243458 3250204 ECH