Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0467 ATGGAGATTGTAGGATTGGGTTTTCGTCCAACAGACGAGGAGCTTGTGAACTATTACCTCAAACACAAGTTGTTGGATGATGATCCCCGAGTCCACGTCATCCCCGACATTGACCTTTGTGAAGTGGAACCTCAGGACTATTCAAACAGTAAGAGGCTTAACAGGACAACCAAGTGTGGCTTCTGGAAACCTACCGGAAAAGACCGTGAAATTAGGAGTAAGGACACCAACAATGTCATTGGGACTAAGAAAACTCTTGTTTACTATGAAGGCAAGGCTTCCCGTGGTGTTAAGTCCAACTGGGTTATTCATGAATATCACGCTGTTACCAGCTTTCATCAAAGCCAGACTTTTGTTTTATGTCGCTTGATGAAGAAACCTGGTAAAACAACTGAAGAGGGGACTGATGCATCGATTTGTGATGAAGGAGAGCCCAGTAGACTCATGGTTTCTCACTATGAAAATCAAGCAACAGCAGAAGGAGTTCCATCTGGAGGTGCTTTTACAGGAATGGAAAGAACCTTTCAGGGAATGCATGAGTACACTCTTCCCACTGGTATTGAGCAGGAAGAACCATCCTTTACAAACTATGCATTTAGCAATGTCTATTTTAGAAATGAAGACAACGTTATGCAGACTCCGTCTGAAACTAAAGAGGAGGATGAGTTCCTGAATTCAATTTTAAAAGTATGCATGCTTTTGCCAATAGCTCCACCCAATCAGTATCATCCAAGACTAGAAAACTTAACATCACAAAAGACTGATGAAGATCTGAGACACAGAGGAAGGCTTCAAACAATGCAGTATCGCATTCTTGATACCCGTGTAATTGAAATGTGA 840 0.4202 MEIVGLGFRPTDEELVNYYLKHKLLDDDPRVHVIPDIDLCEVEPQDYSNSKRLNRTTKCGFWKPTGKDREIRSKDTNNVIGTKKTLVYYEGKASRGVKSNWVIHEYHAVTSFHQSQTFVLCRLMKKPGKTTEEGTDASICDEGEPSRLMVSHYENQATAEGVPSGGAFTGMERTFQGMHEYTLPTGIEQEEPSFTNYAFSNVYFRNEDNVMQTPSETKEEDEFLNSILKVCMLLPIAPPNQYHPRLENLTSQKTDEDLRHRGRLQTMQYRILDTRVIEM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0467 279 Pfam No apical meristem (NAM) protein 5 48 IPR003441 GO:0003677|GO:0006355
Aed2g0467 279 Pfam No apical meristem (NAM) protein 46 107 IPR003441 GO:0003677|GO:0006355
Aed2g0467 279 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 4 240 - -
Aed2g0467 279 ProSiteProfiles NAC domain profile. 2 126 IPR003441 GO:0003677|GO:0006355
Aed2g0467 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 240 - -
Aed2g0467 279 SUPERFAMILY NAC domain 4 126 IPR036093 GO:0003677|GO:0006355
Aed2g0467 279 Gene3D NAC domain 48 131 IPR036093 GO:0003677|GO:0006355
Aed2g0467 279 Gene3D NAC domain 11 47 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0467 Aed-Chr2 3234346 3236166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0467 4 127 NAC Transcription Factor Family AT4G35580 45.752 4.23e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed2g0467 NAM 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0467 - - gmx:100779816 367.851