Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0459 ATGACCAACCATCACTTCAAACACTCCATTCTCTCTGTTTTTCTCATGCCATCACCATCTTCATTTGCATATTCTTCCCTCTACATGGTTTCTATCATATTCTTATTCCTCTTGCCCTTGTTTGTTGTTCAAGTCTCCTCTTGTGACCAGATTGATAAACTCTCCCTCTTGGCCTTCTCTGGGAACATATCCACTTCTCCACCTTATCCTTCTCTCAACTGGTCTGATTCTCTTGATTGTTGCAGCTGGGAGGGCATTACTTGTGATGGGGATCTTAGAGTCACACACCTTTTGCTACCATCTAGAGGCCTCACTGGCTTCTTCTCTTCCCCTTCTCTCACAAACCTCTCTTCTCTCACACACCTTAATCTCTCCCATAACAGATTCTCTGGTGCTCTCCAACACCACTTCTTCTCATCACTGCTCAATCACTTGCTGGTACTTGATTTGAGCTACAACCGTCTCTCTGGTGAATTGCCACCTTTTGTTGCCAAAAACAGCAGTGGTGGTGGTGGTGTTATTCAGGAACTGGATTTGTCTAGTAACCGTTTTAATGGGACACTTCCAAGTTCTTTGCTTGAGCACTTGGCAGCAGCTGGTGGGAGTTTTGTGTCTCTGAATGTTAGTAATAACAGCCTCACAGGTCAAATTCCCACTTCTCTCTTTTGCATTAATGACCATAACTCATCATCCTCTCTCAGATTCTTGGATTACTCCTCCAATGATTTTGATGGTGACATTCGGCCTGGACTAGGAGCATGTTCCAAGCTGGAGAAGTTTAGAGCAGGTTTCAATTTTCTGTCAGGGTCTATCCCAAGTGATCTTTTTGATGCTGTTTCTCTCACTGAAATCTCATTGCCCCTCAATAGACTCACTGGAACTATTGGTGATGGTATTGTTCGCCTTACCAACCTCACAGTTTTGGAGCTCTACTCCAATCATTTCACAGGTTTCATTCCTCATGATATTGGTAAACTCTCCAATTTGGAACGGCTGCTCCTTCATGTCAACAATTTGACAGGTACTATCCCACCATCTCTGATGAACTGTGCCAATCTTGTGGTGTTGAATTTAAGGGTCAACAACTTGGAGGGAAATCTCTCTGCATTCAATTTCTCAGGATTCATCAGACTCACCACACTTGACCTTGGCAACAATCATTTTGCTGGTGTTTTACCACCAACCCTTTATGCATGCAAGTCACTTTCAGCTGTGAGGCTAGCATCTAATAAGCTTGAGGGAGAGATTTCACCCAAGTTACTTGAACTAGAGTCTTTGTCTTTCCTATCAATTTCTGATAACAAGTTGAGGAATGTCACTGGGGCTCTGAGAATACTCAGGGGGCTCAAGAACCTTAGTACCCTTATGCTCTCCAAGAATTTTTTCAATGAAATGATACCACAAGATGTGAACATAATAGAGCCAGATGGATTCCAAAAACTCCAGGTTTTAGGATTTGGTGGTTGTAATTTCACAGGTCAAATACCAAGTTGGCTTGTAAAACTGAAGAAGCTTGAGGTCTTGGACCTGTCCTTTAATCAAATTAGTGGTCCAATTCCTCCTTGGTTGGGTACACTTTCTCAGCTTTTCTACATGGACTTGTCTGTTAACCTCCTCACAGGAGTATTTCCAATAGAGCTCACAGAACTCCCAGCACTGGCATCACAACAGGCAAATGATAAAGTAGAAAGGACTTACTTTGAGTTACCTGTCTTTGCTAATGCAAACAATGTTTCCCTACTGCAATATAATCAGCTTTCAGGCCTGCCTCCAGCAATATATCTGGGAATCAATCACCTTAATGGCAGTATCCCTATTGAGATTGGGAAGCTGAAAGTCCTTCATCAGCTGGATCTGAAAAAAAACAACTTCTCTGGTGATATACCGATTCAGTTTTCAAACTTGACTAACTTAGAGAAACTAGACCTCTCAGGAAACCAACTATCTGGTGAAATTCCTGATTCCCTCAGAAGATTACATTTCTTGTCTTTTTTCAGTGTAGCATTCAACAATCTTCAAGGACAGATACCAACTGGTGGTCAATTTGATACTTTCTCCTATTCCAGCTTTGAAGGAAATGTGCAATTGTGCGGTTCGGTTATTCAGCGCTCTTGTCCTTCTCAACAAAATACTACTAATACTACTACTGCAGCTACACACAGCTCAAACAAAAAAGTACTGATTGTACTCATCATTGGAGTCAGTTTTGGCTTTGCTTCCTTGATAGGAGTGTTGACACTGTGGATACTCTCCAAGAGGAGGGTCAATCCAGGAGGAGTGTCTGACAAGATTGAAATGGAATCAATTTCTGCCTATTCCAACAATGGAGTTCATCCTGAGGTTGATAAGGAGACTAGCCTAGTGGTATTGTTTCCCAACAAGAATAATGAAGCCAAGGACCTAACCATATTTGAGATCCTAAAAGCCACTGAAAATTTCAGTCAGGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACATTACCAAATGGAACTACACTGGCCATCAAGAAACTTTCAGGAGACTTGGGCCTCATGGAAAGGGAATTCAAAGCAGAGGTAGAGGCTTTGTCAAATGCACAACATGAGAATCTGGTGGCATTGCAAGGCTATTGTGTGCATGGTGGATTCCGGCTTCTCATGTATAATTACATGGAAAATGGAAGCCTGGATTACTGGTTGCATGAAAGGCCTGATGGTGCATCTCAACTTGATTGGCCAACTCGCTTGAAGATCGCACAGGGTGCAAGCTGTGGTTTGGCTTATTTGCATCAGATATGTGAACCACACATTGTGCATCGCGATATCAAGTCGAGCAATATACTCCTTAATGAAAAATTTGAGGCACATGTTGCCGATTTTGGGTTGTCCAGATTGATTCTTCCATATCATACTCATGTTACAACTGAACTTGTAGGTACATTAGGATACATTCCCCCGGAGTATGGACAAGCATGGGTGGCTACTCTGAGAGGAGACGTGTACAGCTTTGGAGTTGTCATGCTTGAGCTTCTCACTGGGAGGAGGCCTGTGGATGTATGCAAGCCAAAAATGTCAAGGGAGTTGGTTGGCTGGGTTCAGCAAATGAGGATTGAAGGAAAACAAGATCAAGTGTTTGACACTCTTCTGAGAGGGAAGGGGTTTGAAGGACAGATGCTGAAGGTACTGGATGTGGCTTCCATGTGTGTCAGCCACAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAAGAATGTTGAATCAAACAACCAGCCAACACAGAAATAA 3291 0.4263 MTNHHFKHSILSVFLMPSPSSFAYSSLYMVSIIFLFLLPLFVVQVSSCDQIDKLSLLAFSGNISTSPPYPSLNWSDSLDCCSWEGITCDGDLRVTHLLLPSRGLTGFFSSPSLTNLSSLTHLNLSHNRFSGALQHHFFSSLLNHLLVLDLSYNRLSGELPPFVAKNSSGGGGVIQELDLSSNRFNGTLPSSLLEHLAAAGGSFVSLNVSNNSLTGQIPTSLFCINDHNSSSSLRFLDYSSNDFDGDIRPGLGACSKLEKFRAGFNFLSGSIPSDLFDAVSLTEISLPLNRLTGTIGDGIVRLTNLTVLELYSNHFTGFIPHDIGKLSNLERLLLHVNNLTGTIPPSLMNCANLVVLNLRVNNLEGNLSAFNFSGFIRLTTLDLGNNHFAGVLPPTLYACKSLSAVRLASNKLEGEISPKLLELESLSFLSISDNKLRNVTGALRILRGLKNLSTLMLSKNFFNEMIPQDVNIIEPDGFQKLQVLGFGGCNFTGQIPSWLVKLKKLEVLDLSFNQISGPIPPWLGTLSQLFYMDLSVNLLTGVFPIELTELPALASQQANDKVERTYFELPVFANANNVSLLQYNQLSGLPPAIYLGINHLNGSIPIEIGKLKVLHQLDLKKNNFSGDIPIQFSNLTNLEKLDLSGNQLSGEIPDSLRRLHFLSFFSVAFNNLQGQIPTGGQFDTFSYSSFEGNVQLCGSVIQRSCPSQQNTTNTTTAATHSSNKKVLIVLIIGVSFGFASLIGVLTLWILSKRRVNPGGVSDKIEMESISAYSNNGVHPEVDKETSLVVLFPNKNNEAKDLTIFEILKATENFSQANIIGCGGFGLVYKATLPNGTTLAIKKLSGDLGLMEREFKAEVEALSNAQHENLVALQGYCVHGGFRLLMYNYMENGSLDYWLHERPDGASQLDWPTRLKIAQGASCGLAYLHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKPKMSRELVGWVQQMRIEGKQDQVFDTLLRGKGFEGQMLKVLDVASMCVSHNPFKRPSIREVVEWLKNVESNNQPTQK 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0459 1096 ProSitePatterns Protein kinases ATP-binding region signature. 819 842 IPR017441 GO:0005524
Aed2g0459 1096 SUPERFAMILY L domain-like 47 285 - -
Aed2g0459 1096 SMART LRR_typ_2 326 350 IPR003591 -
Aed2g0459 1096 SMART LRR_typ_2 116 140 IPR003591 -
Aed2g0459 1096 SMART LRR_typ_2 375 399 IPR003591 -
Aed2g0459 1096 SMART LRR_typ_2 142 166 IPR003591 -
Aed2g0459 1096 SMART LRR_typ_2 635 659 IPR003591 -
Aed2g0459 1096 SMART LRR_typ_2 423 445 IPR003591 -
Aed2g0459 1096 SMART LRR_typ_2 302 325 IPR003591 -
Aed2g0459 1096 SMART LRR_typ_2 502 526 IPR003591 -
Aed2g0459 1096 Gene3D Ribonuclease Inhibitor 370 714 IPR032675 -
Aed2g0459 1096 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Aed2g0459 1096 ProSiteProfiles Protein kinase domain profile. 813 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0459 1096 SMART serkin_6 813 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0459 1096 Gene3D Ribonuclease Inhibitor 277 369 IPR032675 -
Aed2g0459 1096 Pfam Protein kinase domain 814 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0459 1096 PANTHER OS06G0692500 PROTEIN 31 1089 - -
Aed2g0459 1096 Pfam Leucine rich repeat N-terminal domain 52 89 IPR013210 -
Aed2g0459 1096 SUPERFAMILY L domain-like 227 554 - -
Aed2g0459 1096 Gene3D Ribonuclease Inhibitor 198 276 IPR032675 -
Aed2g0459 1096 Gene3D Phosphorylase Kinase; domain 1 776 888 - -
Aed2g0459 1096 PRINTS Leucine-rich repeat signature 635 648 - -
Aed2g0459 1096 PRINTS Leucine-rich repeat signature 145 158 - -
Aed2g0459 1096 SUPERFAMILY L domain-like 478 704 - -
Aed2g0459 1096 Gene3D Ribonuclease Inhibitor 50 197 IPR032675 -
Aed2g0459 1096 PANTHER LEUCINE RICH REPEAT KINASE 2 31 1089 - -
Aed2g0459 1096 SMART LRR_sd22_2 423 451 - -
Aed2g0459 1096 SMART LRR_sd22_2 635 661 - -
Aed2g0459 1096 SMART LRR_sd22_2 302 331 - -
Aed2g0459 1096 SMART LRR_sd22_2 502 517 - -
Aed2g0459 1096 Gene3D Transferase(Phosphotransferase) domain 1 889 1096 - -
Aed2g0459 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 935 947 IPR008271 GO:0004672|GO:0006468
Aed2g0459 1096 Pfam Leucine Rich repeat 117 130 IPR001611 GO:0005515
Aed2g0459 1096 Pfam Leucine Rich repeat 503 517 IPR001611 GO:0005515
Aed2g0459 1096 SUPERFAMILY Protein kinase-like (PK-like) 799 1084 IPR011009 -
Aed2g0459 1096 Pfam Leucine rich repeat 614 672 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0459 Aed-Chr2 3182191 3185481 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0459 15 748 Miscellaneous Gene Families AT1G17240 50.609 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Aed2g0459 Pkinase 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0459 - - gmx:100781943 1902.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0459 2 3182191 3185481 Aed2g0459 2 3182191 3185481 ECH