Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0456 ATGGTGTTGGATCCAAGGCTGGTGCTGTTCATCACCACCTGCATTTTGGCCATCAATGGCGACACAGATCCAAATGACGTTTCTTCTCTGAAGGCTTTGTTTCAAAGTATGAACTCACCATCCCAGCTAAATTGGAATGGTGATGATCCTTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTAGCAATCGAGTCACAGAGATTAAGTTACCTGGTCGTTCACTTTCTGGATCTTTGGGTTTCCAGCTAGAACCCTTGTCATCTGTGACAAACCTAGACTTGAGTAACAACAATCTTGGTGGCTCCATACCATACCAACTTCCTCCTAATGTGCAGTACTTAAATCTTGCTAATAATAATTTCAATGGGGCAATCCCTTATTCTCTTTCTGAGAAGACTTCGCTTATAGTCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTGGATTTCCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCTTTCAATTCTTTGACAGGTGACCTGCCTCAGACTATAAGCTCACTTTCTAGCATAAGCACCATGTATCTGCAGAACAACCAGTTTACAGGCACCATTGATGTCCTTGCTAATCTGCCTCTTGAAACTTTGAATGTGGGAAACAATCATTTTACTGGCTGGGTACCAGAACAATTGAAAAACATAATACAAAAGGATGGTAATGCATGGAGCTCGGGACCTGCACCCCCACCACCTCCTGGGACACCTCCAGTAGAACCAAGAAACCGAAATCACAAATCTGGCGGACATAGCCCATCTGATGCTGGCTCAAGTGATGGTGGAGACAAAAAATCTGGTATAGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAGATCCAAAAAGTCGTCTAATGATGTTGAAAAGTTTGACAATCAGCCCTTGGCTCAACATGAAGTGCACGAAATTAATTCCATGCAAACTTCGTCTGTAATTGACTTGAAGACATTTGATACGTCTGCAGCCCCAATAAGCCTTAAACCCCCACCTTTTGATCGTCACAAATCATTTGATGAGGATGAGTTTTCAAACAAGCTCACTATAGTCAATAAGCCCACTAAAGTCAAGAAGACTGTTACTGCTCCTACAAATGTAAAGTCGTATTCTATAGCTGACTTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTCTTGGTGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGAAGACGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTACCCCATGATTTGTCTGAAGATTTTATAGAACTAGTTTCAAACATATCCCATTGGCATCATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCACGGACAACACCTACTAGTCTATGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTACCTGATGACTATAGCAAACCATTGATATGGAATTCACGTGTGAAGATTGCTTTGGGTATTGCACGTGCTTTAGAGTATCTACATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCGGCCAACATATTGCTTGATACAGATCTTAATCCTCATCTTTCCGACAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGCTTTGGTTCGATGGGCAACACCTCAACTCCACGATATCGATGCTTTGGCTAAAATGGTTGATCCTGCATTGGAAGGACTGTACCCTGTGAAGTCTCTTTCTCGATTTGCAGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTGGTCCGATTAGTGCAGCGAACTAACATGAGCAAGAGGACGTTTGGAGCCGATCAAGGAGGAACCAACAGAGGGGGTGATGATGACCAAGAAACACAAGACATGTAA 1980 0.4318 MVLDPRLVLFITTCILAINGDTDPNDVSSLKALFQSMNSPSQLNWNGDDPCGQSWQGITCSSNRVTEIKLPGRSLSGSLGFQLEPLSSVTNLDLSNNNLGGSIPYQLPPNVQYLNLANNNFNGAIPYSLSEKTSLIVLNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTISSLSSISTMYLQNNQFTGTIDVLANLPLETLNVGNNHFTGWVPEQLKNIIQKDGNAWSSGPAPPPPPGTPPVEPRNRNHKSGGHSPSDAGSSDGGDKKSGIGGGGIAGIVISILVVGAIVAFFLVKRRSKKSSNDVEKFDNQPLAQHEVHEINSMQTSSVIDLKTFDTSAAPISLKPPPFDRHKSFDEDEFSNKLTIVNKPTKVKKTVTAPTNVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFEDGKVLAVKKIDSSVLPHDLSEDFIELVSNISHWHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDDYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSDSGLASYIPNANQALVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGADQGGTNRGGDDDQETQDM 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0456 659 PANTHER OS01G0253100 PROTEIN 563 655 IPR045271 GO:0004714|GO:0006468
Aed2g0456 659 Pfam Protein tyrosine and serine/threonine kinase 408 565 IPR001245 GO:0004672|GO:0006468
Aed2g0456 659 MobiDBLite consensus disorder prediction 636 659 - -
Aed2g0456 659 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Aed2g0456 659 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 12 566 - -
Aed2g0456 659 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 563 655 - -
Aed2g0456 659 Gene3D Ribonuclease Inhibitor 25 133 IPR032675 -
Aed2g0456 659 Gene3D Phosphorylase Kinase; domain 1 366 483 - -
Aed2g0456 659 PRINTS Leucine-rich repeat signature 156 169 - -
Aed2g0456 659 PRINTS Leucine-rich repeat signature 89 102 - -
Aed2g0456 659 ProSiteProfiles Protein kinase domain profile. 406 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0456 659 Gene3D Transferase(Phosphotransferase) domain 1 563 644 - -
Aed2g0456 659 MobiDBLite consensus disorder prediction 230 276 - -
Aed2g0456 659 SUPERFAMILY L domain-like 41 225 - -
Aed2g0456 659 Pfam Leucine rich repeat 109 169 IPR001611 GO:0005515
Aed2g0456 659 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Aed2g0456 659 PANTHER OS01G0253100 PROTEIN 12 566 IPR045271 GO:0004714|GO:0006468
Aed2g0456 659 SUPERFAMILY Protein kinase-like (PK-like) 375 625 IPR011009 -
Aed2g0456 659 Gene3D Ribonuclease Inhibitor 134 235 IPR032675 -
Aed2g0456 659 MobiDBLite consensus disorder prediction 236 250 - -
Aed2g0456 659 Gene3D Transferase(Phosphotransferase) domain 1 484 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0456 Aed-Chr2 3150684 3158400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0456 7 659 Strubbelig Receptor Gene Family AT1G53730 60.359 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aed2g0456 PK_Tyr_Ser-Thr 9.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0456 - - gmx:100780323 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0456 2 3150684 3158400 Aed2g0456 2 3150684 3158400 ECH