Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0452 ATGAGTGAAAGTGGCACCGCAATGGGTGAATCCTACACAATTGAGATCACAGGGAAGATCATGGTGGTGGCCATAATATTCCTCTTCATGGTGGTTGTCTTTGTTCTCGTGCTTCATCTCTATGCAAAATGGTTCTGGTGGAGCATGGAGGAGAACGCCGCACCTCAGCCCCTCCAGAGGCGCCGCCGCCGGAGGTTTGTCTTCGCCCCCGGCCAAGACCCGGTGGCCTATGAGAATGAGACTCACCAAGTTGGGCTTGAGCCCTCAGTTCTCAAGTCCTTGCCAGTGTTGTTGTTCAAACCTGAGGACTTCAAAGAAGGTTTGGAGTGTGCAGTTTGTCTCTCTGAGATTGCTGAAGGTGAAAAGTTAAGGCTTTTGCCCAAATGCAATCATGGGTTTCATGTGGATTGCATTGACATGTGGTTCCATTCACACACCACTTGTCCACTTTGTAGGAACCCTGTTGCTTCTCAATCCTCTAAAACTACTGAAGAGAATAATAGTGATCCATCATCATCATCACATGAAGAGAATTCAAGTTTGGAGCCTTCAAGTTTTCCCACAAATGTGTTGGTTTGGGGGAACCAGACACAAGTTAGTTCTTTTGGGGTTTCCTTGGAAGAAAAACAAGAAGAAGGTACTTCTCAGTCTCCGCAACTACCTAGTTCTTCATCACCTGCATCATCTTCTTCTTCAGAAAGTGGTAATGCTAATAATAGTAGGTGTCATGGAATGTTGGTGATTGATATTCCAAGTGAGTGCACTTCCCCCTCTTTGTCACCTTCTGGGAGTAGGTGTGCTGAAGATGAAGTGAAATCACCAATGGCTGCCACATTGAGGTCATTCAAGAGGCTTTTGAGCAGGGACAAAAAGTTAAGTCCTAGTTCTGTAGACGTGGAACAAGCACAGAGCTAG 915 0.4623 MSESGTAMGESYTIEITGKIMVVAIIFLFMVVVFVLVLHLYAKWFWWSMEENAAPQPLQRRRRRRFVFAPGQDPVAYENETHQVGLEPSVLKSLPVLLFKPEDFKEGLECAVCLSEIAEGEKLRLLPKCNHGFHVDCIDMWFHSHTTCPLCRNPVASQSSKTTEENNSDPSSSSHEENSSLEPSSFPTNVLVWGNQTQVSSFGVSLEEKQEEGTSQSPQLPSSSSPASSSSSESGNANNSRCHGMLVIDIPSECTSPSLSPSGSRCAEDEVKSPMAATLRSFKRLLSRDKKLSPSSVDVEQAQS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0452 304 Pfam Ring finger domain 109 152 IPR001841 -
Aed2g0452 304 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 298 IPR044675 -
Aed2g0452 304 CDD RING-H2_EL5_like 109 152 - -
Aed2g0452 304 PANTHER RING-H2 FINGER PROTEIN ATL3 4 298 - -
Aed2g0452 304 MobiDBLite consensus disorder prediction 203 241 - -
Aed2g0452 304 MobiDBLite consensus disorder prediction 156 187 - -
Aed2g0452 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 158 IPR013083 -
Aed2g0452 304 MobiDBLite consensus disorder prediction 253 273 - -
Aed2g0452 304 SMART ring_2 110 151 IPR001841 -
Aed2g0452 304 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Aed2g0452 304 SUPERFAMILY RING/U-box 90 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0452 Aed-Chr2 3117108 3118022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0452 15 290 C3H Transcription Factor Family AT1G53820 41.830 1.27e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0452 - - gmx:100775523 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0452 2 3117108 3118022 Aed2g0452 2 3117108 3118022 ECH