Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0447 ATGACCAACCCAAAACTAGGCTACGCCGGAATCTCCGAAGATTCCGGCAACCGCATTTCCCCCTCTAAGAAAAGCCACAAGAAGCTCCTCCTCTCGCTCTTGGCCACCCTCCTCGTGGCGGCCTCCGTGGTGGCCATTGTCGCCGGAGTAAAAAACAAAAGCAAAGACTCCTCCGTGGACACCAGCACTACCTCTCTCTCCCTCTCCCACCACTCCCACGCGATGATAAAGAGCGCGTGCAGCTCCACATTCTACCCGGAACTCTGCTTCTCCGCCATCGCCTCGGAGCCCAACGTGACGCGAAAAGTGACCACCCACCGCGACGTGATCCAGCTCTCCCTGGACATCACCACCCGCGCCGTGGAGCACAACTACTTCACCGTCAAAAAGCTCCTCGGCAAACACGGCCTTACGAAACGCGGCAAAACCGCGCTTCACGACTGTCTCGAGACCATAGACGAAACCCTGGACGAACTCCGTGAGGCCCAGCACGACCTCAAACTCTACCCCAACAAGAAAACTCTCTACCAGCACGCCGACGATCTCAAAACCCTCATCAGCGCCGCGCTAACCAACCAGGTCACGTGCCTCGACGGTTTCTCCCACGACGACGCTGACAAGCACGTGAGGAAGGCCCTCGAGGAAGGACACGTCCACGTGGAACGCATGTGCAGCAACGCATTGGCCATGACTAAGAACATGACCGACAATGACATAGCCAATTATGAATACAAGATGAAGTTGGAAAATGGTCAAAATAGTAATAACAATAGGAAGTTGTTGGCGGGGAATGATGATGTAGTTGAGTGGCCGGAGTGGATTTCGGCGGCGGATAGGAGGCTTCTGCAGGCGGAGACGGTGAAGGCCGACGTAGTGGTGGCGGCGGACGGAAGTGGGGACTTCAAGACGGTGTCGGAGGCGGTTGATGCGGCTCCGTTGAAGAGTAGTAAGAGGTTTGTTATAAAAATAAAAGCTGGGGTGTATAGAGAGAACGTTGAGGTGCCTAAGAAGAAGACTGATATCATGTTCTTGGGTGATGGGAGAACCAACACTATCATCACTGCTAGCAGAAACGTCGTTGACGGTAGCACCACTTTCCACTCTGCCACCGTCGCTGTGGTGGGTGCAAATTTCTTAGCCAGGGACATAACATTCCAAAACACAGCGGGTCCCTCAAAGCACCAAGCTGTGGCCCTAAGAGTAGGTGGGGACCTCTCAGCATTCTTCAATTGTGACATCCTAGCATTCCAAGACACCCTTTATGTCCACAACAATAGACAATTCTTTGTCAAGTGCCTAATTGCAGGGACAGTGGATTTCATCTTTGGCAACTCAGCAGTGGTGTTCCAAGACTGTGACATCCACGCTAGGCTTCCTAACTCGGGCCAGAAGAACATGGTCACGGCCCAAGGGAGAGTTGACCCTAACCAAAACACTGGCATTGTGATCCAGAAGTGTAGGATTGGTGCCACTAAGGACTTGGAGCCTGTTAAGAACAACTTCAAGACTTATCTTGGGAGGCCTTGGAAGGAGTACTCTAGGACTGTGATCATGCAGAGTAGTATAAGTGATGTGATTGACCCTGTTGGGTGGCATGAGTGGAGTGGAAACTTTGCATTGAACACTTTGGTTTATAGGGAGTATCAGAACACTGGGCCTGGTGCTGGTACTTCAAATAGGGTCACTTGGAAAGGGTATGAGGTCATCACTGATGCTGCTGAGGCCAGAGGTTTTACTCCTGGAAGCTTCATTGGGGGCTCTAGCTGGTTGGGCTCCACAGGCTTTCCTTTCTCTCTTGGCTTGTAA 1806 0.5233 MTNPKLGYAGISEDSGNRISPSKKSHKKLLLSLLATLLVAASVVAIVAGVKNKSKDSSVDTSTTSLSLSHHSHAMIKSACSSTFYPELCFSAIASEPNVTRKVTTHRDVIQLSLDITTRAVEHNYFTVKKLLGKHGLTKRGKTALHDCLETIDETLDELREAQHDLKLYPNKKTLYQHADDLKTLISAALTNQVTCLDGFSHDDADKHVRKALEEGHVHVERMCSNALAMTKNMTDNDIANYEYKMKLENGQNSNNNRKLLAGNDDVVEWPEWISAADRRLLQAETVKADVVVAADGSGDFKTVSEAVDAAPLKSSKRFVIKIKAGVYRENVEVPKKKTDIMFLGDGRTNTIITASRNVVDGSTTFHSATVAVVGANFLARDITFQNTAGPSKHQAVALRVGGDLSAFFNCDILAFQDTLYVHNNRQFFVKCLIAGTVDFIFGNSAVVFQDCDIHARLPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEPVKNNFKTYLGRPWKEYSRTVIMQSSISDVIDPVGWHEWSGNFALNTLVYREYQNTGPGAGTSNRVTWKGYEVITDAAEARGFTPGSFIGGSSWLGSTGFPFSLGL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0447 601 Gene3D - 284 601 IPR012334 -
Aed2g0447 601 CDD PMEI-like_3 78 235 - -
Aed2g0447 601 TIGRFAM PME_inhib: pectinesterase inhibitor domain 63 234 IPR006501 GO:0004857
Aed2g0447 601 Pfam Plant invertase/pectin methylesterase inhibitor 75 230 IPR006501 GO:0004857
Aed2g0447 601 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Aed2g0447 601 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 235 IPR035513 -
Aed2g0447 601 SUPERFAMILY Pectin lyase-like 286 600 IPR011050 -
Aed2g0447 601 SMART PMEI_2 71 230 IPR006501 GO:0004857
Aed2g0447 601 PANTHER PECTINESTERASE 24 600 - -
Aed2g0447 601 Pfam Pectinesterase 290 586 IPR000070 GO:0030599|GO:0042545
Aed2g0447 601 PANTHER PECTINESTERASE 24 600 - -
Aed2g0447 601 Coils Coil 145 165 - -
Aed2g0447 601 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 236 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0447 Aed-Chr2 3080503 3085702 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0447 23 601 Carbohydrate Esterase AT3G14310 69.192 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0447 K01051 - gmx:100776623 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0447 2 3080503 3085702 Aed2g0447 2 3080503 3085702 ECH