Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0445 ATGGATACGATAAAGTCATTCAAGGGCTATGGCAAAGTAGACGAGTTGGAGCAGCAAGCCTATCATAAGAAGACACGTAAGCGACTCATAATCATAACAGTCTCTTCCATCGTTCTAGTTGCGGTGATCATCGCCGCGGTTGCAGGGGTTGTCATACACAAGCGCAACACCTCATCATCGCCCTCCTCTGACTCGGCCCCGCAAACTGAGTTAGCCCCGGCCGCATCACTCAAAGTGGTCTGCGACGTGACTCAGTACCCTAACTCGTGCTTCTCCGCAATCTCCTCGTTACCGGAATCCAACACTACTGATCCGGAGCTACTCTTCAAGCTCTCGCTCCGCGTCGCCATTGACGAGCTCTCCAAGCTCTCCAGCTTCCCTTCCAAGCTCCGCGCCAATGCGGAAAAGGACTGGCGTTTCCAGAAGGCGATCGATGTCTGCGGGAACGTTTTCGGCGACGCGCTGGACCGCCTCAACGACTCGATCTCCGTGCTCGATGGCGCCGCCGTCCGAGCCGGAAAGCTTATTTCTCGGGCTAGCGTCAAGGACGTGGAGACGTGGCTCAGCGCTTCGCTCACGGACCAGGACACGTGTCTCGACGCGCTCGGCGAGCTCAACTCCACCGCCTCGCGCGGAGCGCTCAGCGAAATCGGAACCGCCATGAGGAACTCCACGGAGTTCGTGAGCAACAGTTTGGCCATTGTAACGAAGATCCTAGGGTTGCTGTCGCAGTTCGAGCCGACGATTCACCATCGGCGGCTGCTAGGGTTTCCGGAGTGGCTCGGCGCGGCGGAGCGGAGGCTGCTTCAGGCGAACAGCAGCGAAACGACGCCGGACGCTGTGGTGGCGAAGGACGGTAGCGGACAGTTCAAGACGATCGGCGAGGCGCTGAAATTGGTGATGAAGAAGAGCGAGAAGAGATTCATCGTACACGTGAAGGAAGGGCGTTACGTTGAGAACATCGATTTGGATAAGAACACTTGGAATGTGTTTATCTTCGGTGATGGGAAGGACAAAACCATCGTCATCGGTAGCCGGAACTTCATCGACGGGACGCCGACTTTCGATACCGCCACCTTTGCTGTTAAAGGCAAGGGATTCATTGCCAAAGACATAGGGTTTTGGAACACTGCAGGTGCATCTAAGCACCAGGCTGTGGCATTGAGATCTGGCTCGGACCGTTCTGTGTTCTTTAGATGCTCATTTAACGGATTCCAGGATACCCTCTATGCCCATTCCAACCGCCAGTTCTACCGTGACTGTGACATTACAGGCACCATAGACTTCATATTCGGCAATGCAGCTGCAGTGTTCCAAAGTTGCAAAATAATGCCCAGACAGCCTCTGCCAAACCAGTTCAACACCATCACAGCTCAGGGCAAGAAGGATCCCAACCAGAACACTGGAATCATAATCCAGAAATCATCATTCACTCCCTTGGAAAACAATCTCACAGCTCCCACATACCTTGGTAGGCCATGGAAAGATTTCTCCACCACCGTGATCATGCAATCTGATATTGGGTCATTCTTGAAACCAGTGGGGTGGATGAGTTGGGTCCCCAATGTGGAACCTGCAAGTACCATCTTCTATGGTGAATACCAGAATAGTGGGCCTGGGGCTGACGTATCCCAGAGGGTCAAATGGGCCGGGTATAGGCCCACTCTCACGGACGGAGAGGCAGGGAAGTTCACTGTGCAGTCCTTTATTCAAGGCCCCGAGTGGTTGCCAAATGCTGATGTGCACTTTGATTCCACCTTGTGA 1764 0.5397 MDTIKSFKGYGKVDELEQQAYHKKTRKRLIIITVSSIVLVAVIIAAVAGVVIHKRNTSSSPSSDSAPQTELAPAASLKVVCDVTQYPNSCFSAISSLPESNTTDPELLFKLSLRVAIDELSKLSSFPSKLRANAEKDWRFQKAIDVCGNVFGDALDRLNDSISVLDGAAVRAGKLISRASVKDVETWLSASLTDQDTCLDALGELNSTASRGALSEIGTAMRNSTEFVSNSLAIVTKILGLLSQFEPTIHHRRLLGFPEWLGAAERRLLQANSSETTPDAVVAKDGSGQFKTIGEALKLVMKKSEKRFIVHVKEGRYVENIDLDKNTWNVFIFGDGKDKTIVIGSRNFIDGTPTFDTATFAVKGKGFIAKDIGFWNTAGASKHQAVALRSGSDRSVFFRCSFNGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAAVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSSFTPLENNLTAPTYLGRPWKDFSTTVIMQSDIGSFLKPVGWMSWVPNVEPASTIFYGEYQNSGPGADVSQRVKWAGYRPTLTDGEAGKFTVQSFIQGPEWLPNADVHFDSTL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0445 587 CDD PMEI-like_3 80 238 - -
Aed2g0445 587 SMART PMEI_2 72 234 IPR006501 GO:0004857
Aed2g0445 587 SUPERFAMILY Pectin lyase-like 277 585 IPR011050 -
Aed2g0445 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 239 IPR035513 -
Aed2g0445 587 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Aed2g0445 587 Gene3D - 273 587 IPR012334 -
Aed2g0445 587 Pfam Plant invertase/pectin methylesterase inhibitor 78 234 IPR006501 GO:0004857
Aed2g0445 587 ProSitePatterns Pectinesterase signature 1. 304 323 IPR018040 -
Aed2g0445 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 239 IPR035513 -
Aed2g0445 587 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 238 IPR006501 GO:0004857
Aed2g0445 587 PANTHER PECTINESTERASE 1-RELATED 8 584 - -
Aed2g0445 587 Pfam Pectinesterase 279 572 IPR000070 GO:0030599|GO:0042545
Aed2g0445 587 PANTHER PECTINESTERASE 8 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0445 Aed-Chr2 3075525 3078631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0445 1 581 Carbohydrate Esterase AT1G53840 57.744 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0445 - - gmx:100784642 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0445 2 3075525 3078631 Aed2g0445 2 3075525 3078631 ECH