Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0429 ATGTGTGGTGGTGCTATTATCTCCGACTTCATTCCGGCGGGTCCCGCCGCCGGCGCTCGGCGCGTGACCGCTGACATCCTATGCCAATCTTTGTATGTGTTTGTTTTTGGATCAGCAACTGTGAAATCTGTGGAGCCCAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAATCAGTACAGGGGCATCCGCCAGCGTCCTTGGGGAAAGTGGGCTGCTGAGATCCGCGACCCGAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAGGAAGCTGCCAGAGCTTATGATGCTGAAGCAAGGAAGATCCGCGGCACTAAAGCCAAGGTGAATTTCCCTGATGAGCAGCCTTCAGGCGCTTCCGCAAAACGCGTCAAGGCAAGTCCAGAGGCTCAGTCAATGAAGGAAAATCTGAACTCTTTGAAGCCGAAAATGAACCAGATGTTCCATTTTGGCGACAGTCTGCAGGACTACTACAGCACTTTTGATCAGGTGGAACAGAAACCACTTGTTAACCAGTATGTCAACCATGCCCCATTTGCTGGAAATGGAGTTCAAGTCTCACCTATGACTCCATCTGCTGATGTTGCCGCTTACTTCAGTTCTGAGCATTCAAGCAACTCGTTTGACTATTCTGACCTTGGATGGGGTGAACAAGTCCCAAAGACTCCTGAGATCTCATCCGTGCTCTCTGCGGCTCCTTTGGAGGGTGAATCTCAGTTTGTGCAGGGTGCTGCTGCTGATCAGATTCAGAAGAAGAACAACTCGCAGGATGTGGTGACTACCGGGCAAGATGATTCTGCAAAGACTCTCTCTGAGGAGCTTGCTGACATTGAATCCCAGCTGAAGTTCTTTGAGACCCCATATCTCGATGAGGCCTGGGCTGATGCTACATTGGCGTCTTTGCTCAGCAGCGATGCAACAACTCCGGATGCTGGAAACCCTATGAACATGAACCTTTGGAGCTTTGACGACCTGCCTTCCATGGCAGGAGTCTTCTAA 1017 0.5113 MCGGAIISDFIPAGPAAGARRVTADILCQSLYVFVFGSATVKSVEPKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARKIRGTKAKVNFPDEQPSGASAKRVKASPEAQSMKENLNSLKPKMNQMFHFGDSLQDYYSTFDQVEQKPLVNQYVNHAPFAGNGVQVSPMTPSADVAAYFSSEHSSNSFDYSDLGWGEQVPKTPEISSVLSAAPLEGESQFVQGAAADQIQKKNNSQDVVTTGQDDSAKTLSEELADIESQLKFFETPYLDEAWADATLASLLSSDATTPDAGNPMNMNLWSFDDLPSMAGVF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0429 338 Pfam AP2 domain 61 110 IPR001471 GO:0003700|GO:0006355
Aed2g0429 338 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Aed2g0429 338 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Aed2g0429 338 PANTHER DNA-BINDING DOMAIN 38 333 IPR044808 GO:0003700|GO:0009873
Aed2g0429 338 SUPERFAMILY DNA-binding domain 61 120 IPR016177 GO:0003677
Aed2g0429 338 Gene3D AP2/ERF domain 60 119 IPR036955 GO:0003700|GO:0006355
Aed2g0429 338 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Aed2g0429 338 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Aed2g0429 338 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Aed2g0429 338 MobiDBLite consensus disorder prediction 115 136 - -
Aed2g0429 338 PANTHER EREBP TRANSCRIPTION FACTOR 38 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0429 Aed-Chr2 2966655 2969262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0429 48 338 AP2-EREBP Transcription Factor Family AT1G53910 44.295 2.85e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g0429 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0429 K09286 - gmx:100818646 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0429 2 2966655 2969262 Aed2g0429 2 2966655 2969262 ECH