Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0417 ATGGCTAATGAAGGAGACAAAAGCAGTAACTTCTATACGATCTTGGGGTTGAAGAAGGAGTGCACTGAATTGGAGCTGAAGAATGCTTATAGGAAACTTGCAAAGAAATGGCACCCAGATCGTTGTTCAGCGACCGGGAATTCAGAGTTAGTGGAAGAAGCTAAGAAAAAATTTCAGGAAATTCGGGAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTAGGAGTCTACGATAGTGATGACGACGAAAACGGCATGGGGGACTTCTTGGACGAAATGTTAACAATGATGAGTCAGACCAAATCAAATGAAAATGGAAAGGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAGACATGTTTCAAGCGGATATTGGATTGGATGGAGGCCCTTCTCTTGCTTCTTCTGATTGCTCAACTTCATCTGCTTACATGACTTATACTGAAAGTTCTAGTTCGAATAAACGCAATTCCTCTGATATGAATTTAGGAAAGGCAGAGAATTCTTCTGTCTTTGATGCCAGTTACCAGAATTTCTGTTTTGGGGTGAACCAACTCCAAGATATAAAGAAGGGAAAGGGGGGAATTCCAGAAGGAGGAGGTAGAAATAGACATTGA 633 0.4139 MANEGDKSSNFYTILGLKKECTELELKNAYRKLAKKWHPDRCSATGNSELVEEAKKKFQEIREAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNENGKESFEELQQLFEDMFQADIGLDGGPSLASSDCSTSSAYMTYTESSSSNKRNSSDMNLGKAENSSVFDASYQNFCFGVNQLQDIKKGKGGIPEGGGRNRH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0417 210 SMART dnaj_3 9 73 IPR001623 -
Aed2g0417 210 Coils Coil 51 71 - -
Aed2g0417 210 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Aed2g0417 210 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 200 - -
Aed2g0417 210 CDD DnaJ 10 70 IPR001623 -
Aed2g0417 210 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Aed2g0417 210 SUPERFAMILY Chaperone J-domain 8 93 IPR036869 -
Aed2g0417 210 Gene3D DnaJ domain 7 134 IPR036869 -
Aed2g0417 210 Pfam DnaJ domain 10 78 IPR001623 -
Aed2g0417 210 PRINTS DnaJ domain signature 53 73 IPR001623 -
Aed2g0417 210 PRINTS DnaJ domain signature 12 30 IPR001623 -
Aed2g0417 210 PRINTS DnaJ domain signature 73 92 IPR001623 -
Aed2g0417 210 PRINTS DnaJ domain signature 30 45 IPR001623 -
Aed2g0417 210 PANTHER PUTATIVE, EXPRESSED-RELATED 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0417 Aed-Chr2 2875413 2878423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0417 12 78 C2H2 Transcription Factor Family AT1G74250 45.588 1.82e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0417 - - gmx:100791192 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0417 2 2875413 2878423 Aed2g0417 2 2875413 2878423 ECH