Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0413 GGTAAATTGGGTATAACGCCGGAGACCACGGAAACAGGTCCACCAACTGAGCCGGTGACGGAGTTTCGCCACACTCCAATCACATTCTGCCACGTCATACTCCCTTCCTCTGCCCACTCCCCACGTGTCGACGGTCACCGTCAACTCACCCCCCTTCCGTCAATCGAAACCCGAAAAAAGGCGCAGACACCACCGCCGAATAGTCTGGCATTAGCGCTTCCGATTCAGCAGCCGGCAAAGGGGAGCGGCGGAGGAGGCGGCGGCGGTGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCGGTGCTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGAGATCGTGAGCGGCAGAGAGGATTACACGAAGGCGCCGAAGACCGATATCCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTACGACAGATTGGAACAATTAATCGGTCCTAGCGCCAAGATCCCCGGAGCCGGCGGTTCCTCCGGCGCCGGCGGCCCCAGCGCTGCTGGAAACAGTAATTTACAACAGCAGAAAGTTCCGTTAGGGATTCCAGTCGGAGTTCGCGGCGGCGCGAATCAGTTTCACCATCCTCAAAAACCGCACCAGCAGCAGCAGCAACCGGTTTCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGTTGAGTCCGATTCGGAGGAGCGCGAGGCGTCTTCGCCGGCGTCGAGCGACAGTTTTCCGCCGGAGAGTTTCGAGCGGAAGAGGCCGCGGTTGATGAATTCAAACACGGCGAAAGGAAGCGGAGAAAGACGGAAGACGACGAAGGGTTGGGGCAGCGCGGTGAGGGAATTGACGCAGGCGATTCTGAAATTCGGCGAGGCGTATGAACAAGCTGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAAAAGCAGAGGATGAAGTTCGCAAAGGATTTGGAGTTGCAGAGAATGCAAAAACGAACTGTCTTATCAAATGAGAGTGCAGAGCAGATATTCTTTAATGTGAGAGATACACTCAATGATTAA 1143 0.5669 GKLGITPETTETGPPTEPVTEFRHTPITFCHVILPSSAHSPRVDGHRQLTPLPSIETRKKAQTPPPNSLALALPIQQPAKGSGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLEQLIGPSAKIPGAGGSSGAGGPSAAGNSNLQQQKVPLGIPVGVRGGANQFHHPQKPHQQQQQPVSLKNQKIQFRRRGPPVESDSEEREASSPASSDSFPPESFERKRPRLMNSNTAKGSGERRKTTKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQKRTVLSNESAEQIFFNVRDTLND 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0413 380 MobiDBLite consensus disorder prediction 253 269 - -
Aed2g0413 380 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 65 357 IPR044823 -
Aed2g0413 380 MobiDBLite consensus disorder prediction 187 309 - -
Aed2g0413 380 Pfam Myb/SANT-like DNA-binding domain 92 182 IPR044822 -
Aed2g0413 380 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 65 357 - -
Aed2g0413 380 MobiDBLite consensus disorder prediction 231 248 - -
Aed2g0413 380 MobiDBLite consensus disorder prediction 39 69 - -
Aed2g0413 380 Gene3D - 95 160 - -
Aed2g0413 380 MobiDBLite consensus disorder prediction 200 214 - -
Aed2g0413 380 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0413 Aed-Chr2 2859002 2861155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0413 63 357 Trihelix Transcription Factor Family AT3G14180 48.774 7.24e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed2g0413 Myb_DNA-bind_4 2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0413 - - gmx:100812599 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0413 2 2859002 2861155 Aed2g0413 2 2859002 2861155 ECH