Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0411 ATGGCTGGTGATTCTTTTTCCTTTGAGGGTGACTCCTTCTCAAGCCACCAGAGACCACACTATCCAACACCAGTGAGTTATCGCAGTGTGTCTGGCCATGGCTCAGGCTCAGGTTCTTTCATACCATCCAGCTCTCTAAGCAATGCCACTTCCACAACCCGAAGAGCTCGCCGCCGCAATCGAGTTCCCACCACACCCTTTGCTTCAGATGATGACCGTTCATGGCAAGGAGAGGTTTCATGGAAGTTTGAGGCCACCGGGTGGCGCGATTACAGCACAAACTTTGGTTCTGTTCTGAATCCTTTGCCAGATAGCTCCCCTTATGGTCACAGCAGGATATTTCGTCGATCAGCCAATGACTACTACCTTTCAAGATCAAGAGGTCTTGCAAACTCTTCTTATGAACAATCTGGCTATGGTAGAGTAGAACTTCAGAGCTATGTTGCTAGAAACAATGATTATAGCTACTTCAACCAGCCTAGTCAGCCACAAGGATTGTCAAAATTGGGGTTCATCCAAGAGAAGAGTAGTAGAAAAGATAAGAGTAGTCCGTTGGCAGAGGAAGATGAACTTAGCATGATAGAATATAGCATAAATGAAGAGCCTGTTATATCACATAATAAGAATGGTCATGGTCTTGAATCACCATATTTGAAACATGGTCATGTTGGTCATGATGGACTATCATCACATGGTAGCCAAATGTATGGAAGTGGTGGTGGTGGTTATGCTTATAGTCATGGCCGTGACATTGAGAAGTTTTTAGCATATGATGAAGAAGGTGAGGAGGATATGGATGAGGAAGATGAAAGGCCTCCAAAGACAGTTGGGCTTTTCAGCTTGTTTAGGTACTCAACAAAGCTGGATTTGGTGCTTGTGTTTGTGGGGTGTTTAGGGGCACTCATAAATGGAGGAGCACTTCCTTGGTACTCTTATCTTTTTGGAGACGTGGTCAATAAGATCTCAGAAGCTGAGAATGACAAAAAACAGATGATGAATGATGTAGAGAGGGCTTCTTATAGGAAAGCTGGTAGCATTGCGGAGCAGGCCATAAGTTCAATTAGGACAGTGTTTTCATTTGTTGCAGAAAGCCAATTGGCAAGAAAATATGCTGAACTGCTGCAAAGTTCATCTCCAATAGGGGCCAGAGTTGGTTTTGCTAAAGGTATAGGCATGGGAGTTATCTACTTAATAACCTATTCAACATGGGCACTGGCTTTCTGGTATGGCTCTATATTAATTGCCAGGAATGATCTTGATGGAGGTTCAGCTATTGCTTGTTTCTTTGGAGTTAATGTTGGGGGAAGAATTCCTGAGATTGATTCCTATAGCCCTGAGGGTAGGAAGCTTTCTGGTGTTCGTGGAAGGATTGAGTTAAAAAACGTTAGTTTTGCATATCCGTCTCGTCCTGATTCTCTTATATTCCATTCCCTTAACTTGGTATTGCAATCTTCAAAAACTGTGGCATTGGTTGGTGCCAGTGGTGGGGGGAAGTCCACTATCTTTGCTCTCATAGAGAGGTTTTATGACCCTACTGAAGGGATTATTACCTTGGATGGTCATGATTTGAGGACATTGCAAGTAAAGTGGCTACGTGACCAGATTGGAATGGTTGGTCAGGAGCCAATTCTATTTGCCACGTCTATTCTGGAAAACGTGATGATGGGGAAAGACAATGCCACGAAGAAAGAGGCAATTGCTGCTTGCATTGCTGCTGATGCTCACAGCTTCATCTCTAGCCTGCCACTAAGCTATGACACTCAGGTAGGGGACAGGGGTACAAAACTCTCAGGAGGTCAAAAGCAAAGAATTGCATTGGCTCGAGCAATGATCAAAGATCCTAAAATCCTTCTTCTAGATGAACCTACTAGTGCTCTTGATGCTGAGTCAGAGTCTGCGGTCCAACGTGCCATTGACAAGATATCTGCAGGCCGAACAACCATTGTGATTGCTCACAGGATAGCAACAGTGAAGAATGCTCATGCTATTGTGGTTCTTGAACATGGCTCTGTCACTGAGATTGGTGACCATCGTCAGCTTATGGCAAAAGCAGGAGCATACTACAACCTTGTCAAGCTTGCCACTGAAGCCAATTCAAAACCTCAATATATAGAAAATGGAATGCAAAAAGCCGACGATTTTTCCATCTATGATAAATCTATTTCTGGTTTATCAAGATCAAGATATGTAGTTGATTACTTAAAATCGACGCAGGAGGAGGAGAAACAAGAAGACGTGGAAGATAAGCAAGTGAAAAAGGCAAGCAAATACAGACTTTCAGAAGTATGGAAACTGCAAAAGCCTGAGTTTGTGATGCTATTTTCAGGACTTATTCTGGGAATGTTTGCCGGTGCTATTCTGTCCCTTTTCCCTTTGATATTAGGCATATCCTTGGGAGTATATTTTGGCCATGACACTCAAAAGATGAAAAGAGATGTTGGACACCTTTGTTTAACACTTGTTGGCCTTGGATTTGGCTGTATACTTTCCATGACAGGACAGCAAGGTTTGTGTGGTTGGGCTGGATCAAAGCTGACACAAAGGGTTAGAGACAAGTTGTTTCAATCCATACTGAAACAAGAACCTGGGTGGTTTGATTTTGAAGAAAACTCCACAGGAGTGTTGGTGTCAAGGCTCTCACTAGACTGTGTTAGTTTTCGATCAGTTCTCGGTGACAGATTCTCAGTCCTTCTTATGGGGTTGAGTTCAGCTGTTGTTGGCCTTGGTGTGTCCTTTGTCTTTAACTGGAGACTAACCCTTGTGGCAGCTGCTGTAACTCCTTTGACACTTGGTGCAAGCTACATAAGCTTGATCATAAACATTGGACCGCGAGTGGATAACGATTCTTATGCGAAAGCTAGTAACATTGCTTCTGGTGCAGTGTCAAACATAAGAACAGTTACTACGTTTTCTGCCCAGGAACAGATAGTTAAGTCCTTTGATAGAGCCCTGTCAGAACCCAGGAGAAAATCATTAAGAACTTCACAGCTTCAAGGTTTTATGTTTGGGTTGTTTCAAGGTTCCATGTATGGAGCATACACCTTAACTCTTTGGTTTGGTGCATACCTTGTAGAACACGACAAGGCAAAACTCGGAGACGTGTTTAAGATCTTTCTCATTCTTGTTCTGAGCTCATTTTCCGTGGGACAACTAGCTGGTTTGGCACCAGATACTTCTATGGCGGCTACAGCAATTCCTGCAGTTCAAGATATCATAAAACGTAGGCCATTGATTGAAAATGATAGAACAAAAGGTAGGAATAAGATAGTAGACAGATCAAAGCCGTTCAACATAGAATTCAAGATGGTGACTTTTGCATACCCATCTAGGCCAGAGGTGACTGTGTTGAGGGATTTCTGTTTAAAGGTCAAAGGTGGAAGCACAGTGGCCTTGGTGGGACCAAGTGGATCAGGGAAGTCAACAGTCATATGGTTGACTCAGAGGTTCTATGATCCTGATCAAGGAAAGGTGATGATGAGTGGGAGAGATTTGAGGGAGATTGATGTTAAGTGGTTGAGAAGGCAAATGGCTTTGGTGGGTCAAGAACCTTCATTGTTTGCTGGGAGCATAAGAGACAACATTGCATTTGGGGACCCAAATGCTTCATGGACTGAAATTGAAGAGGCTGCAAAGGAGGCTTACATCCACAAGTTCATCAGTGGCCAGAAACAAAGAATTGCTATAGCAAGGGCCATATTGAAGAAATCAAGGGTGCTTTTGCTTGATGAAGCAAGCAGTGCCTTGGACTTGGAATCAGAGAAGCACATTCAAGAAGCCCTTAAAAATGCTACCAAAGAGGCAACAACCATAATAGTTGCTCACCGTCTTTCCACAATCAGAGAGGCTGACAAGATCGCAGTTATGAGAGATGGGGAAGTGCTGGAGTATGGCAGCCATGACAATCTCATGGCTTCAAGTCAAAATGGCTTGTATGCTAGCCTAGTTCGAGCTGAGACTGAAGCCAATGCCTTTGCTTGA 3978 0.4349 MAGDSFSFEGDSFSSHQRPHYPTPVSYRSVSGHGSGSGSFIPSSSLSNATSTTRRARRRNRVPTTPFASDDDRSWQGEVSWKFEATGWRDYSTNFGSVLNPLPDSSPYGHSRIFRRSANDYYLSRSRGLANSSYEQSGYGRVELQSYVARNNDYSYFNQPSQPQGLSKLGFIQEKSSRKDKSSPLAEEDELSMIEYSINEEPVISHNKNGHGLESPYLKHGHVGHDGLSSHGSQMYGSGGGGYAYSHGRDIEKFLAYDEEGEEDMDEEDERPPKTVGLFSLFRYSTKLDLVLVFVGCLGALINGGALPWYSYLFGDVVNKISEAENDKKQMMNDVERASYRKAGSIAEQAISSIRTVFSFVAESQLARKYAELLQSSSPIGARVGFAKGIGMGVIYLITYSTWALAFWYGSILIARNDLDGGSAIACFFGVNVGGRIPEIDSYSPEGRKLSGVRGRIELKNVSFAYPSRPDSLIFHSLNLVLQSSKTVALVGASGGGKSTIFALIERFYDPTEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATSILENVMMGKDNATKKEAIAACIAADAHSFISSLPLSYDTQVGDRGTKLSGGQKQRIALARAMIKDPKILLLDEPTSALDAESESAVQRAIDKISAGRTTIVIAHRIATVKNAHAIVVLEHGSVTEIGDHRQLMAKAGAYYNLVKLATEANSKPQYIENGMQKADDFSIYDKSISGLSRSRYVVDYLKSTQEEEKQEDVEDKQVKKASKYRLSEVWKLQKPEFVMLFSGLILGMFAGAILSLFPLILGISLGVYFGHDTQKMKRDVGHLCLTLVGLGFGCILSMTGQQGLCGWAGSKLTQRVRDKLFQSILKQEPGWFDFEENSTGVLVSRLSLDCVSFRSVLGDRFSVLLMGLSSAVVGLGVSFVFNWRLTLVAAAVTPLTLGASYISLIINIGPRVDNDSYAKASNIASGAVSNIRTVTTFSAQEQIVKSFDRALSEPRRKSLRTSQLQGFMFGLFQGSMYGAYTLTLWFGAYLVEHDKAKLGDVFKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVQDIIKRRPLIENDRTKGRNKIVDRSKPFNIEFKMVTFAYPSRPEVTVLRDFCLKVKGGSTVALVGPSGSGKSTVIWLTQRFYDPDQGKVMMSGRDLREIDVKWLRRQMALVGQEPSLFAGSIRDNIAFGDPNASWTEIEEAAKEAYIHKFISGQKQRIAIARAILKKSRVLLLDEASSALDLESEKHIQEALKNATKEATTIIVAHRLSTIREADKIAVMRDGEVLEYGSHDNLMASSQNGLYASLVRAETEANAFA 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0411 1325 SUPERFAMILY ABC transporter transmembrane region 336 430 IPR036640 GO:0005524|GO:0016021
Aed2g0411 1325 Pfam ABC transporter transmembrane region 332 432 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0411 1325 Pfam ABC transporter transmembrane region 775 1044 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0411 1325 Gene3D ABC transporter type 1, transmembrane domain 273 332 IPR036640 GO:0005524|GO:0016021
Aed2g0411 1325 Gene3D ABC transporter type 1, transmembrane domain 333 434 IPR036640 GO:0005524|GO:0016021
Aed2g0411 1325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1098 1315 IPR003439 GO:0005524
Aed2g0411 1325 ProSitePatterns ABC transporters family signature. 596 610 IPR017871 GO:0005524
Aed2g0411 1325 PANTHER - 336 436 - -
Aed2g0411 1325 PANTHER ABC TRANSPORTER B FAMILY 336 436 - -
Aed2g0411 1325 PANTHER ABC TRANSPORTER B FAMILY 101 337 - -
Aed2g0411 1325 CDD ABC_MTABC3_MDL1_MDL2 457 694 - -
Aed2g0411 1325 SMART AAA_5 484 685 IPR003593 -
Aed2g0411 1325 SMART AAA_5 1125 1292 IPR003593 -
Aed2g0411 1325 Coils Coil 321 341 - -
Aed2g0411 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1093 1316 IPR027417 -
Aed2g0411 1325 Gene3D - 1096 1319 IPR027417 -
Aed2g0411 1325 Gene3D - 455 707 IPR027417 -
Aed2g0411 1325 PANTHER - 101 337 - -
Aed2g0411 1325 Pfam ABC transporter 476 624 IPR003439 GO:0005524
Aed2g0411 1325 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 776 1060 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0411 1325 Pfam ABC transporter 1117 1245 IPR003439 GO:0005524
Aed2g0411 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 693 IPR027417 -
Aed2g0411 1325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 457 693 IPR003439 GO:0005524
Aed2g0411 1325 SUPERFAMILY ABC transporter transmembrane region 762 1079 IPR036640 GO:0005524|GO:0016021
Aed2g0411 1325 PANTHER - 436 1324 - -
Aed2g0411 1325 MobiDBLite consensus disorder prediction 1 73 - -
Aed2g0411 1325 Gene3D ABC transporter type 1, transmembrane domain 946 1095 IPR036640 GO:0005524|GO:0016021
Aed2g0411 1325 MobiDBLite consensus disorder prediction 8 53 - -
Aed2g0411 1325 Gene3D ABC transporter type 1, transmembrane domain 436 937 IPR036640 GO:0005524|GO:0016021
Aed2g0411 1325 CDD ABC_6TM_Pgp_ABCB1_D2_like 763 1078 - -
Aed2g0411 1325 PANTHER ABC TRANSPORTER B FAMILY 436 1324 - -
Aed2g0411 1325 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 336 429 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0411 Aed-Chr2 2836133 2842307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0411 270 335 Calmodulin-binding Proteins AT2G36910 35.714 1.43e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0411 K05658 - gmx:100816700 1738.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0411 2 2836133 2842307 Aed2g0411 2 2836133 2842307 ECH